| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0086 |
|---|
| Symbol | |
|---|
| ID | 4655268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 109554 |
|---|
| End bp | 110192 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639810042 |
|---|
| Product | tripartite ATP-independent periplasmic transporter DctQ |
|---|
| Protein accession | YP_957380 |
|---|
| Protein GI | 120553029 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.370743 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTGT CTGATAAAGG CTCACCGCCT GAGGTGCACG CGTCGGCGTC GGACGCCGGT
CAATTTATTC ATCATCACAC CGAATTTCCG ACCACCCGGT TCAGCCAGGT TCTGGACGGT
GTGATTTCTG CGATAGGCAA GAGTGCTTCC TGGCTCTGGT TTGTGGTCAC CGGCGTGATC
ATTTATGCCG TGGTGGGCCG CTACGCGTTT GGTATGGGGT CGGTCACCCT GGAGGAAGTC
CAGTGGCACC TGGCCGGCGC TGGTTGGTTG TTGGGGCTGG GCTATACCCT GGTAACTGAT
GATCACGTGA GGGTGGATGT CATCCATGAG CGACTGTCGC TCAGGGGCCA GGCCTGGATT
GAACTGTTTG GCCTGCTGTT TCTCTTGTTG CCGTTTCTGG GATTGGCGGT CTACGAGATG
ATTCCCTATG CAGTGAGTTC CTGGGAGCAG GGCGAGACCA GCCAGGCACC GGCGGGCCTT
CCTTACCGCT GGATTCTCAA GGGCATTCTG GCGCTGTCTT TTGCCCTTCT GATCATAGCG
GCCCTGTCCC GTCTGCTGAA AGTTACCGCT TTGCTTTTCG GCTTTCCGAA GCCAATCCGG
GTCGAATCCG GTGAGAACAA GAAAGAGGAT GCGTCCTGA
|
|---|
| Protein sequence | MAVSDKGSPP EVHASASDAG QFIHHHTEFP TTRFSQVLDG VISAIGKSAS WLWFVVTGVI
IYAVVGRYAF GMGSVTLEEV QWHLAGAGWL LGLGYTLVTD DHVRVDVIHE RLSLRGQAWI
ELFGLLFLLL PFLGLAVYEM IPYAVSSWEQ GETSQAPAGL PYRWILKGIL ALSFALLIIA
ALSRLLKVTA LLFGFPKPIR VESGENKKED AS
|
|---|
| |