Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_0084 |
Symbol | |
ID | 4655266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | + |
Start bp | 106662 |
End bp | 108074 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639810040 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_957378 |
Protein GI | 120553027 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGT TGTTTACCAA CAAGAACAAG AGCGGCCTGA CCCGTGACCT GATCGAAGCC CTGTTTCCCA TGTTTGAGGA GGCCAGTGCC GGTGCCATTG CAGTGGATCG GGAAACCAAC ATTACCTGGA TCAACGGCAG TTATTCCCAG TTGCTGGGGC TCGGGGATCC TTCGCAGGCG ATCGGAAAGC CGGTGCGCAA GGTAATCCCG CAGACCCGGA TGCCAGAGGT GATTGAAACC GGCAAACCCC TGTTGCTGGA CATCATGGAG CACAATGAGC AGCAACTGGT GGTCACTCGA CTGCCGTATT ACGACGATCA GGGCGGCATT GTCGGTGCTG TTGCCTTCGT GCTCTACGAT GACCTGCAAC CGCTGACACC GCTGGTGTCC AAATACCGGC GCCTGCACCG CGATCTGGCC GCTGCCCGCA AGGCCCTGGC GAAGAAAAGC CGTGGCACCC GCTACAGTCT GGGCGATTTT GTCGGGGGCA GTCCGGCGGC CCTCGAGGTA AAGCGCCGGG CGCGACTGGC GGCTGGCCGG GACATGCCGG TACTGCTGCT GGGGGAAACC GGCACCGGCA AAGAGGTGTT AGCCCAGGCT ATCCATGCGG TCTCTCCCAG GGCAGATAAG CCCTTTGTTG GTGTGAACGT GGCTGCGGTG CCGGAAAACC TGCTGGAGGC GGAATTCTTC GGTGTCGCTC CGGGCGCTTA CACCGGTGCA GACCGTCGTA CCCGGGAGGG CAAGTTCCAA CTGGCCAACG GGGGCACGCT GTTTCTGGAT GAGGTGGGGG ATATGCCGCT GCCGTTGCAG GCCAAGCTGT TGCGGGCGTT GCAGGAGGGC GAAATTGAGG CTCTGGGCTC GAACAAGGTA ACGACAGTGG ATGTGCGGGT GATTGCGGCC ACCAGTCGCA ACCTGGAGGC CATGATTGCT GAAGGCAGCT TTCGTTCAGA CCTCTATTAC CGGCTGAATG TGCTGGAGAT CAATATCCCG CCCCTGCGGG ACCGATTGGC CGATCTGGGC GTGCTGTGTG AAGCCCTGCT GGGTGAAATC TGTGAGGGTC AGGACATGCG TGGCGAGATT ACCGATGCCG GTGTCGCGGC CCTGGGCAGT TACGACTGGC CGGGCAACAT CCGGGAATTG CGCAACGTGC TCGAGCGGGC CCTGACTATG AGCGAAGACG GTGACCTGCT GGATGCCGAT GCCATCTTCA AAGTGTTACC CCGTGCTGGC CAGCGTCTGG TCTCTCCGGT TCCCGCCCGC TCTGTGCGGC CGCTGGCCCG CATTGTGGCT GAGGCCGAAG CCCAGGCGAT TGAAGAGGCC CTGGTGACCT GCCGTGGCAA CCGTACCAAG GCCGCCCGGC TGCTGGGGAT TTCCCGTTCT GTACTCTATG AAAAGCTGGC CAAGCTGTCC TGA
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Protein sequence | MSELFTNKNK SGLTRDLIEA LFPMFEEASA GAIAVDRETN ITWINGSYSQ LLGLGDPSQA IGKPVRKVIP QTRMPEVIET GKPLLLDIME HNEQQLVVTR LPYYDDQGGI VGAVAFVLYD DLQPLTPLVS KYRRLHRDLA AARKALAKKS RGTRYSLGDF VGGSPAALEV KRRARLAAGR DMPVLLLGET GTGKEVLAQA IHAVSPRADK PFVGVNVAAV PENLLEAEFF GVAPGAYTGA DRRTREGKFQ LANGGTLFLD EVGDMPLPLQ AKLLRALQEG EIEALGSNKV TTVDVRVIAA TSRNLEAMIA EGSFRSDLYY RLNVLEINIP PLRDRLADLG VLCEALLGEI CEGQDMRGEI TDAGVAALGS YDWPGNIREL RNVLERALTM SEDGDLLDAD AIFKVLPRAG QRLVSPVPAR SVRPLARIVA EAEAQAIEEA LVTCRGNRTK AARLLGISRS VLYEKLAKLS
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