Gene Maqu_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_0084 
Symbol 
ID4655266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand
Start bp106662 
End bp108074 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content62% 
IMG OID639810040 
Productsigma-54 dependent trancsriptional regulator 
Protein accessionYP_957378 
Protein GI120553027 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGT TGTTTACCAA CAAGAACAAG AGCGGCCTGA CCCGTGACCT GATCGAAGCC 
CTGTTTCCCA TGTTTGAGGA GGCCAGTGCC GGTGCCATTG CAGTGGATCG GGAAACCAAC
ATTACCTGGA TCAACGGCAG TTATTCCCAG TTGCTGGGGC TCGGGGATCC TTCGCAGGCG
ATCGGAAAGC CGGTGCGCAA GGTAATCCCG CAGACCCGGA TGCCAGAGGT GATTGAAACC
GGCAAACCCC TGTTGCTGGA CATCATGGAG CACAATGAGC AGCAACTGGT GGTCACTCGA
CTGCCGTATT ACGACGATCA GGGCGGCATT GTCGGTGCTG TTGCCTTCGT GCTCTACGAT
GACCTGCAAC CGCTGACACC GCTGGTGTCC AAATACCGGC GCCTGCACCG CGATCTGGCC
GCTGCCCGCA AGGCCCTGGC GAAGAAAAGC CGTGGCACCC GCTACAGTCT GGGCGATTTT
GTCGGGGGCA GTCCGGCGGC CCTCGAGGTA AAGCGCCGGG CGCGACTGGC GGCTGGCCGG
GACATGCCGG TACTGCTGCT GGGGGAAACC GGCACCGGCA AAGAGGTGTT AGCCCAGGCT
ATCCATGCGG TCTCTCCCAG GGCAGATAAG CCCTTTGTTG GTGTGAACGT GGCTGCGGTG
CCGGAAAACC TGCTGGAGGC GGAATTCTTC GGTGTCGCTC CGGGCGCTTA CACCGGTGCA
GACCGTCGTA CCCGGGAGGG CAAGTTCCAA CTGGCCAACG GGGGCACGCT GTTTCTGGAT
GAGGTGGGGG ATATGCCGCT GCCGTTGCAG GCCAAGCTGT TGCGGGCGTT GCAGGAGGGC
GAAATTGAGG CTCTGGGCTC GAACAAGGTA ACGACAGTGG ATGTGCGGGT GATTGCGGCC
ACCAGTCGCA ACCTGGAGGC CATGATTGCT GAAGGCAGCT TTCGTTCAGA CCTCTATTAC
CGGCTGAATG TGCTGGAGAT CAATATCCCG CCCCTGCGGG ACCGATTGGC CGATCTGGGC
GTGCTGTGTG AAGCCCTGCT GGGTGAAATC TGTGAGGGTC AGGACATGCG TGGCGAGATT
ACCGATGCCG GTGTCGCGGC CCTGGGCAGT TACGACTGGC CGGGCAACAT CCGGGAATTG
CGCAACGTGC TCGAGCGGGC CCTGACTATG AGCGAAGACG GTGACCTGCT GGATGCCGAT
GCCATCTTCA AAGTGTTACC CCGTGCTGGC CAGCGTCTGG TCTCTCCGGT TCCCGCCCGC
TCTGTGCGGC CGCTGGCCCG CATTGTGGCT GAGGCCGAAG CCCAGGCGAT TGAAGAGGCC
CTGGTGACCT GCCGTGGCAA CCGTACCAAG GCCGCCCGGC TGCTGGGGAT TTCCCGTTCT
GTACTCTATG AAAAGCTGGC CAAGCTGTCC TGA
 
Protein sequence
MSELFTNKNK SGLTRDLIEA LFPMFEEASA GAIAVDRETN ITWINGSYSQ LLGLGDPSQA 
IGKPVRKVIP QTRMPEVIET GKPLLLDIME HNEQQLVVTR LPYYDDQGGI VGAVAFVLYD
DLQPLTPLVS KYRRLHRDLA AARKALAKKS RGTRYSLGDF VGGSPAALEV KRRARLAAGR
DMPVLLLGET GTGKEVLAQA IHAVSPRADK PFVGVNVAAV PENLLEAEFF GVAPGAYTGA
DRRTREGKFQ LANGGTLFLD EVGDMPLPLQ AKLLRALQEG EIEALGSNKV TTVDVRVIAA
TSRNLEAMIA EGSFRSDLYY RLNVLEINIP PLRDRLADLG VLCEALLGEI CEGQDMRGEI
TDAGVAALGS YDWPGNIREL RNVLERALTM SEDGDLLDAD AIFKVLPRAG QRLVSPVPAR
SVRPLARIVA EAEAQAIEEA LVTCRGNRTK AARLLGISRS VLYEKLAKLS