Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_0048 |
Symbol | aroE |
ID | 4656998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | + |
Start bp | 69901 |
End bp | 70728 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639810004 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_957342 |
Protein GI | 120552991 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.282753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAACG ATCTGTATGC CGTGGTGGGC AACCCCATCA GCCACAGCAA ATCACCCCGT ATCCACAGCC TGTTCGCCCA ACAGACCGGT GAGGCCGTGG AATACACCGC GATTCAGGCG CCGCTGGAGG ATTTCGCCGG CACCGTTCAT CATTTCTTTG ACCACGGCGG CAAGGGTCTG AACATTACGG TGCCGTTCAA GGAACAGGCC TGGACCCTGG CCGAGCACCG GACTCACCGG GCCGAGCTGG CAGGTGCCGC CAATACTCTC TATCTGGATC AAGAAGACCA GCTGGTGGCC GATAACACAG ATGGTGTGGG TATTGTTCGC GACCTCCGGG ACAACCATGG TGTGCCTCTT AAAGGCGCGC GAGTACTGGT GCTGGGCGCT GGTGGTGCGG TGCGCGGGGT GCTCGGGCCT CTGCTGGACG AGCAGCCCGC CAGTGTGGTT GTGGCCAATC GTACTGTCGC CAGGGCCGAA GCGCTGGCCC GGCTGTTCGG CCGGGAACAC AGTGGCATTG AACTCTCGGC CTGTGGTTTT GAGCAGGTCG AAGGACCGTT TGATCTGGTG ATCAACGGCA CCAGCGCCAG CCTGAAGGGC GACTTGCCAG CCATTACGGC AGATGTGATC CGCGCAGATA CCGTGGTCTA CGACATGATG TATTCTCTGC AGACCACCAC GTTTAACCAG TGGGCCCTGG ATCATGGCGC CGTACGCGTG TTTGACGGTC TGGGCATGTT GGTGGAACAG GCTGCCGAAG CTTTTTTCGT GTGGCGGGGC GTACGCCCGG AAACCTCGGC CGTCACCGAG GAACTGAGAA CAGACTGA
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Protein sequence | MTNDLYAVVG NPISHSKSPR IHSLFAQQTG EAVEYTAIQA PLEDFAGTVH HFFDHGGKGL NITVPFKEQA WTLAEHRTHR AELAGAANTL YLDQEDQLVA DNTDGVGIVR DLRDNHGVPL KGARVLVLGA GGAVRGVLGP LLDEQPASVV VANRTVARAE ALARLFGREH SGIELSACGF EQVEGPFDLV INGTSASLKG DLPAITADVI RADTVVYDMM YSLQTTTFNQ WALDHGAVRV FDGLGMLVEQ AAEAFFVWRG VRPETSAVTE ELRTD
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