Gene Maqu_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_0048 
SymbolaroE 
ID4656998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand
Start bp69901 
End bp70728 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content61% 
IMG OID639810004 
Productshikimate 5-dehydrogenase 
Protein accessionYP_957342 
Protein GI120552991 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.282753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAACG ATCTGTATGC CGTGGTGGGC AACCCCATCA GCCACAGCAA ATCACCCCGT 
ATCCACAGCC TGTTCGCCCA ACAGACCGGT GAGGCCGTGG AATACACCGC GATTCAGGCG
CCGCTGGAGG ATTTCGCCGG CACCGTTCAT CATTTCTTTG ACCACGGCGG CAAGGGTCTG
AACATTACGG TGCCGTTCAA GGAACAGGCC TGGACCCTGG CCGAGCACCG GACTCACCGG
GCCGAGCTGG CAGGTGCCGC CAATACTCTC TATCTGGATC AAGAAGACCA GCTGGTGGCC
GATAACACAG ATGGTGTGGG TATTGTTCGC GACCTCCGGG ACAACCATGG TGTGCCTCTT
AAAGGCGCGC GAGTACTGGT GCTGGGCGCT GGTGGTGCGG TGCGCGGGGT GCTCGGGCCT
CTGCTGGACG AGCAGCCCGC CAGTGTGGTT GTGGCCAATC GTACTGTCGC CAGGGCCGAA
GCGCTGGCCC GGCTGTTCGG CCGGGAACAC AGTGGCATTG AACTCTCGGC CTGTGGTTTT
GAGCAGGTCG AAGGACCGTT TGATCTGGTG ATCAACGGCA CCAGCGCCAG CCTGAAGGGC
GACTTGCCAG CCATTACGGC AGATGTGATC CGCGCAGATA CCGTGGTCTA CGACATGATG
TATTCTCTGC AGACCACCAC GTTTAACCAG TGGGCCCTGG ATCATGGCGC CGTACGCGTG
TTTGACGGTC TGGGCATGTT GGTGGAACAG GCTGCCGAAG CTTTTTTCGT GTGGCGGGGC
GTACGCCCGG AAACCTCGGC CGTCACCGAG GAACTGAGAA CAGACTGA
 
Protein sequence
MTNDLYAVVG NPISHSKSPR IHSLFAQQTG EAVEYTAIQA PLEDFAGTVH HFFDHGGKGL 
NITVPFKEQA WTLAEHRTHR AELAGAANTL YLDQEDQLVA DNTDGVGIVR DLRDNHGVPL
KGARVLVLGA GGAVRGVLGP LLDEQPASVV VANRTVARAE ALARLFGREH SGIELSACGF
EQVEGPFDLV INGTSASLKG DLPAITADVI RADTVVYDMM YSLQTTTFNQ WALDHGAVRV
FDGLGMLVEQ AAEAFFVWRG VRPETSAVTE ELRTD