Gene Maqu_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_0004 
Symbol 
ID4654696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand
Start bp4487 
End bp5608 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content53% 
IMG OID639809960 
ProductDNA replication and repair protein RecF 
Protein accessionYP_957299 
Protein GI120552948 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.346024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTAG TCAAACTCCA GACACAGCAT TTCCGAAACC TGTTATCTGC GCCTGTAGAA 
TTTTCACCGT CCTTCAATCT TCTTTATGGC GCCAATGGCA GCGGTAAAAC CAGTGTCCTG
GAAGCGATTG GCTATCTGGG GCTTGGTCGG TCGTTTCGGG TCAGCCGGCA TCAGGCAGTC
GTGGCTCATG GGCAATCGAA ACTGACTGTC TTCGGGGCAC TGGATTCAGG TCTGTTGGCG
CAAGAGTCTT CAGAGAAGGT TGAGCACAGG ATTGGTATTT CCCGGGATGT CAGCCTCAAG
GAAACCCAGT TGCGGGTAGA TGGTGAGGCG GTTCGCAGTC TTTCGTTTCT GGCGATGCAT
CTGCCGGTCT CGGTCATTGA TCCCGGGGTA TTCGACATTG TTGCTGGTGG CCCGGGTAAG
CGTCGGCAGT TTCTGGATTG GTTAGTGTTC CACGTGGAAC CTTCCTTTTC TTCCCTGTGG
CAACAGGTTC AGAGAGTCAC GTCACAGCGG AATCAAATGC TGAGAAATGG TAGACTGGAC
GAATCGTTGA TGCGGGTCTG GGATTCCCAG TACGGCGCCT TGGCGGAGTC GTTGAGTGAC
ATCCGGGAAA CCGTTTTCCA ACGCTTCAAG ATCGCTTTTG AATCGGTGTT GGCGGAGCTG
GATGCGCCCT GGGTGGAAGG TCTGAAGATG GACTTTTATC CGGGCTGGGA TCGAAGCACA
GCGTTGACCG AAGTACTGGT TAACCATCGC GAACAGGAAC GTCGTATGGG TCACACCTTG
TACGGCCCGA ACCGGGCGGA TATCCGTCTG AAGTTTGGTG GTCGTCCGGT GGCGGAAACG
TTCTCTCGGG GGCAGCAAAA GACACTGGTG ATCCTGATGA AGATTGCTCA GGGCAAGGTG
TTGAGTGATC TTGGCAAACA GGTGACGTTT CTGTTGGACG ATATCAACGC CGAGTTGGAT
GTTCGTCATC GCGTTATGCT GGCTCGCAAC TTACAGGAAC TGCGTTGTCA GGTGTTTATC
ACCTCCATTG AGCATCCGGA ACCGGACACG TTGTGGCACG ATGGGGATAC ACCTGAATAC
AGAATGTTCC ACGTGGAACA TGGACAATTG ACGGAAGAAT AG
 
Protein sequence
MALVKLQTQH FRNLLSAPVE FSPSFNLLYG ANGSGKTSVL EAIGYLGLGR SFRVSRHQAV 
VAHGQSKLTV FGALDSGLLA QESSEKVEHR IGISRDVSLK ETQLRVDGEA VRSLSFLAMH
LPVSVIDPGV FDIVAGGPGK RRQFLDWLVF HVEPSFSSLW QQVQRVTSQR NQMLRNGRLD
ESLMRVWDSQ YGALAESLSD IRETVFQRFK IAFESVLAEL DAPWVEGLKM DFYPGWDRST
ALTEVLVNHR EQERRMGHTL YGPNRADIRL KFGGRPVAET FSRGQQKTLV ILMKIAQGKV
LSDLGKQVTF LLDDINAELD VRHRVMLARN LQELRCQVFI TSIEHPEPDT LWHDGDTPEY
RMFHVEHGQL TEE