| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_4019 |
|---|
| Symbol | |
|---|
| ID | 4653294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008739 |
|---|
| Strand | + |
|---|
| Start bp | 115137 |
|---|
| End bp | 116105 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639809868 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_957207 |
|---|
| Protein GI | 120537150 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTCA TCAGCGCAGC GGAACTCGCC GAAGACATAG CCCACTTTGT CGCCTTCAAG
CGTGCGATGG GGCACTCGTA CCGACGCAGT GAGCTGACGC TGAAGAGCTT TCAACGTGCT
GTCGAACAGC GGGCCGGTTG GTATGGCAAG GTGCCGTTTG AAGCCGTGCT GCATGAGTGG
TTGTTGCGCA ATCCACACCG ACAACCCGTC AGCGTGGGAC TGGAGTTTGG CGTCATCCGC
CAACTGTGCC TGTATCGCCG TCGTCGGGAC CCGGACAGCT TTGTGCCGGA ACAGGACTGG
GCACCCATCA AGGAGTCGAC TTTTTTACCG TATATTTTTA CCTATGGCGA GGTCGTTCAT
CTCATTGCCG CAGCCAGCGT TCATAATGCC GGTAAACTCG ACGCCGGCAT GCTGCGTATG
CTGTTGCTGA TACTCTATTG TACCGGCCTG CGACTCGGCG AGGCGGTGCG GTTGCAACTG
TCCGATGTCG ACCTGGAACA GCAGTGCTTT CTTGTCCGGC AGAGCAAGGG AAAAACCCGG
ATTGTACCGT TTCTGGACGA TCTGGCCCGC GAGCTAGGCG ACTGCCTACT GCTGCGACGG
CGCATCCTGG AAGCGACGGC AACCGTTGAC CCGGGCGCTC TGCTGCTACG CAATACCGGA
CAAGCACTGC CGGTGAGGGC CGCTTCAGAC GCTATTTGTC GGCTCCTGCG CCGGGAAGGG
CTCAAGCCCG CCAGGGGCCG GACGGGGCCA CGCCCCTACG AGTTCCGGCA TGCCTTCGCC
GTACATCGGC TGACTGCCTG GTATCACGAG GGCGTCGATA TCCATGCCCG CTTGCCCTGG
CTTTCAGCCT ATATGGGCCA TGTTGACGTG CTCGGTACCC AAGTCTATCT GAGGGCGACA
CCGGAACTGA TGGATCTTGC CAGCCAGCGC TTCGCTCGAC ACTGGTATCA CAGTGGTAAA
ACGTCATGA
|
|---|
| Protein sequence | MNLISAAELA EDIAHFVAFK RAMGHSYRRS ELTLKSFQRA VEQRAGWYGK VPFEAVLHEW
LLRNPHRQPV SVGLEFGVIR QLCLYRRRRD PDSFVPEQDW APIKESTFLP YIFTYGEVVH
LIAAASVHNA GKLDAGMLRM LLLILYCTGL RLGEAVRLQL SDVDLEQQCF LVRQSKGKTR
IVPFLDDLAR ELGDCLLLRR RILEATATVD PGALLLRNTG QALPVRAASD AICRLLRREG
LKPARGRTGP RPYEFRHAFA VHRLTAWYHE GVDIHARLPW LSAYMGHVDV LGTQVYLRAT
PELMDLASQR FARHWYHSGK TS
|
|---|
| |