| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_3989 |
|---|
| Symbol | |
|---|
| ID | 4653133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008739 |
|---|
| Strand | - |
|---|
| Start bp | 89607 |
|---|
| End bp | 90467 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639809840 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_957179 |
|---|
| Protein GI | 120537122 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.333459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAATC TTGTCTGGCT GAAGAGTTTC GTGGCGGTGC TGGACCACAA CGGGTTTCAG
GCCGCAGCCC GCCAGTTGGA CATCGCACAA CCCACACTGT CCCAGCACCT TCAAAAACTC
GAAAACCAAC TTGGCGTTTT ATTGGTCCAC AGGGGGCGCT CTGGCTGTGA GCCAACCCGG
GCTGCCTTAA CCTTGTTGCC TTTTGCCCGA AGTCTGCTCC GGCTGGAGGA GCAGGCGAGA
TCTTCCATTA TGGAGGCTCG ACTTCGCGTT GGGGCGAGCT CCAATATTGG GATTTATATG
CTCCAGCCCT ACATCCGTCG TTACAAGGAG CTGGGCGTAG GGCCCGAGGT GGATGTGGTA
ATAGATTCCA ATCCGACTAT TGCACGGCAT TTATCGGACG GTGAGCTGGA CGTGGCGATT
ATGGAGTGGT GGCATGATCT ACCCGGATTC CATGCTCAGG CGTGGCGTAA CGAGCCCGTT
GTTCTAATCG TTCCGCCTGG TCACCCGTTA GCCCGTCGAA CCGATATCGA CCGCGATACG
CTGTCTAACA TGGCTCTGAT CGGCGGCGAA CCCGGCACCG GCACTGGCCG GCTTTTGGCG
ACCTACTTCG GTGAGCATGG GCCATTTCCG ACGGTATCTA TGCAGCTGGG TAGCACCGAA
GCCGTCAAGC AAGCGGTTAA GGTCGGACTT GGCGCATCGT TGGTGCTTGA AAGTTCTGTA
CGGGAGGAGG TCCAAAATGG AAGTCTGGTG GCTATTCCCG TGAGTGAGCC TGGCCTTAGC
AAGGAGCTGA TGGTGATTTA TCCGAGCAGC CTGGACAAAC ACAGGCCAGT ATACTCGTTT
GTTGGGCATC TCTGTGAATA G
|
|---|
| Protein sequence | MLNLVWLKSF VAVLDHNGFQ AAARQLDIAQ PTLSQHLQKL ENQLGVLLVH RGRSGCEPTR
AALTLLPFAR SLLRLEEQAR SSIMEARLRV GASSNIGIYM LQPYIRRYKE LGVGPEVDVV
IDSNPTIARH LSDGELDVAI MEWWHDLPGF HAQAWRNEPV VLIVPPGHPL ARRTDIDRDT
LSNMALIGGE PGTGTGRLLA TYFGEHGPFP TVSMQLGSTE AVKQAVKVGL GASLVLESSV
REEVQNGSLV AIPVSEPGLS KELMVIYPSS LDKHRPVYSF VGHLCE
|
|---|
| |