Gene Maqu_3939 details

Gene Information

• Locus tag: Maqu_3939
• ID: 4653177
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Marinobacter aquaeolei VT8
• Kingdom: Bacteria
• Replicon accession: NC_008739
• Strand: -
• Start bp: 41246
• End bp: 41782
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 639809794
• Product: lytic transglycosylase, catalytic
• Protein accession: YP_957133
• Protein GI: 120537076

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.307099
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCTCG TTCGTATGCT AACCCTAATG CTTCTATTCA TTAGTGGCCC GAGCGCCGCT 
TCAGACATAC CTGAAATGTA TCTACAGGTC GCAGAAGAAC AAGATGTTCC TGCAAAGCTT 
TTTTACGCGA TCATTTTGAA TGAAAGCCGC AGCACCAATA AGCATATCAA CAGAGTATTG 
CCCTGGCCCT GGACGATTAA CCACCGGGGC ACTCCACATT TTTTCCATAA CAGAGCCGCT 
GCTTATCGGT TTGCACGACA GTTGGTGGAA TCCGGTGATT ACCAGTTCGA TGTCGGTCTT 
GGACAGATGA ACTGGCGCTG GCATCGCCAT CGTTTTAGTG ACCTGTGGGA TGCGTTGGAT 
CCTTACATGA ACCTGACAGC GTCAGCCGCA CACCTGAGGG AGCAATACGA ACGCCCCGAG 
TGTAATTCCT GGGATCTTGC CATTGGTTGT TATCACAGAC CCGCACAGAA GCCATTGGAT 
AAAAGAATTG CTGCCAACTA CCGAGAGAGA GTTATGAAAC TATGGTCAAA CATCTGA 

 

Protein sequence

MSLVRMLTLM LLFISGPSAA SDIPEMYLQV AEEQDVPAKL FYAIILNESR STNKHINRVL 
PWPWTINHRG TPHFFHNRAA AYRFARQLVE SGDYQFDVGL GQMNWRWHRH RFSDLWDALD 
PYMNLTASAA HLREQYERPE CNSWDLAIGC YHRPAQKPLD KRIAANYRER VMKLWSNI