Gene Maqu_3937 details

Gene Information

• Locus tag: Maqu_3937
• ID: 4653175
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Marinobacter aquaeolei VT8
• Kingdom: Bacteria
• Replicon accession: NC_008739
• Strand: -
• Start bp: 38653
• End bp: 40647
• Gene Length: 1995 bp
• Protein Length: 664 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 639809792
• Product: hypothetical protein
• Protein accession: YP_957131
• Protein GI: 120537074
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3505] Type IV secretory pathway, VirD4 components

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.280709
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGTCA GCATTGGTGC AGCCGGGATC TGCCTGCTAT CACCCTCCAC ATTGATGATG 
ACACCGAGTG TTGGCTACAC CTCGGCGGCG GTATTAACCG CGTTCGCTGT ATACCGCTTC 
ATTCAGGGAA CACGGGTTAC CCGATATCAG CGCAACCTCA AGCGTCTGCC ACGATTTGAG 
ATGTCATCGC GCCAGATTCC TTGCTATCGG CAACACCTCT ATTTGGGGCA GGGGTTTCGC 
TGGGGCCAGC ACCATACCCA GCGCTTGAAA GATACGATGG CTCCAGCATT CGCCAAATAC 
ACGAGGCCGT CCCGAATCAA CGCCTGGTTT CGGGAATTTG AGAGAAGAAT AGAGCACACC 
AGATTAGGCT TCCTTGCGGA ACTGACCAGT AAAGATCATC CACTGAATCC CGTGCGACCT 
TACCCGGCTG TCGGCGGGAA TCCGGCCATC CATGCGGTTG AACTCAACGA AAAAGAAGTG 
CTTCTGGCCA TGTCAGAGCG CGTCGGTCAC ACCCTTTGCA TGGGAACGAC CCGAGTCGGT 
AAGAGCCGCC TCGCCGAAAT TCTGATTGAG CAGGACATTC GCCGTAACGA AGGGCCCGTC 
ATCGTATTCG ACCCAAAGTC AGACCCTGGG CTTTTGACCA GGATGTATAT GGCGGCGAAG 
CGAACAGGAA GAACAGACGA TTTTTACATG TTTCACCTCG GTTTCCCGGA GATCAGTGCT 
CGTTACAACG CTATCGGTAA CTTTTCGCGT ATCACTGAAA TTGCCGGCCG CATTTCTGGT 
CAGCTGTCGT CTGAAGGAAA CAGTGCTGCT TTCAAGGAGT TTGCGTGGCG CTTCATTAAT 
ATTGTCGCTC GTGCGCTTGT TTCCCTGGGA ATGCGCCCGG ACTACAACAA CATTCTCCGG 
TACGTGACGG ACATTGAGCC TCTTTTCAAT CAGTACCTGG ATTGGTGGCT GCCAATGAAC 
GGTGATGAAG GCTGGATGGA AGACATCAAT GCGATGACCG CTGATGCCGA ACGGCAATAC 
AGATCCAATC CCCGCATGGC TAAACATGCC AATCCGCGAA CCGAGGCTTT AAGGAAATAC 
GTTGAGCAAA TGCAGGTGAG TGATCCGATC CTGCACGGAC TGCTTTCAGC CTTACGCTAC 
GACAAAACGT ACTTCGACAA GCTGGTAGCG AGTCTTTTGC CCCTTCTTGA GAAGCTCACC 
ACAGGCAGAA TTGGCAAGCT ACTGGCACCC GACTACTTCG ATGTCGACGA TGACCGGCCG 
ATTTTCGACT GGACGCAGAT CATTCGTAAG CGAGGTATTG TCTATATAGG TCTGGATGCC 
ATGACGGACA CAGAAATCTC CTCAGCCGTT GGCAACTCAA TGTTCTCAGA CCTGGTCAGC 
GTCTGTGGAT CTATCTATAA GCACGGCTTC GAACATGGAA TGCTCGAAGG CAAGGCGAAC 
GTTATGCCCA AAGTATGCTT ACATGCAGAC GAGTTCAATG AACTGATGGG GGACGAATTC 
CTCCCCATGG TCAATAAATC GGGCGGTAGC GGCATGCAAA TTACCGCCTA TACGCAGTCC 
CGGGGCGACA TCGAGGCTCG TTTGGGGAAT ACCGCGAAGG CCCGCCAGGT GGAAGGCAAC 
TTCAACAACC TGATTATGCT GCGGGTCAAG GAAAAGGAAA CAGCTGAGCT GCTCACCAAT 
CAACTGCCTG AAGTTGAAAT TGCGCAGATC ATGACGGTAT CTGGCGCGAG TGATTCCTCA 
GACACCGAGT CCAGTGTGGA CTTCACGTCT AATACCCAGG ACCGGATCTC AATGCTCCGT 
GTACCGATGC TGGAGCCCGG ACACATAACC TCATTGCCAA AAGGGCAGGC TTTTTGCCTG 
TTGGATGGCG GTCAACTCTG GAAAGTTAGA TTTCCGCTGC CCGTGGAAGA TGATGAAGAC 
ATGCCCGAGA ATCTTCAGGC GCTCACCCGG GAAATGGATA AAAACTATCA CACGGCGGAA 
AATTGGTGGG CATGA 

 

Protein sequence

MSVSIGAAGI CLLSPSTLMM TPSVGYTSAA VLTAFAVYRF IQGTRVTRYQ RNLKRLPRFE 
MSSRQIPCYR QHLYLGQGFR WGQHHTQRLK DTMAPAFAKY TRPSRINAWF REFERRIEHT 
RLGFLAELTS KDHPLNPVRP YPAVGGNPAI HAVELNEKEV LLAMSERVGH TLCMGTTRVG 
KSRLAEILIE QDIRRNEGPV IVFDPKSDPG LLTRMYMAAK RTGRTDDFYM FHLGFPEISA 
RYNAIGNFSR ITEIAGRISG QLSSEGNSAA FKEFAWRFIN IVARALVSLG MRPDYNNILR 
YVTDIEPLFN QYLDWWLPMN GDEGWMEDIN AMTADAERQY RSNPRMAKHA NPRTEALRKY 
VEQMQVSDPI LHGLLSALRY DKTYFDKLVA SLLPLLEKLT TGRIGKLLAP DYFDVDDDRP 
IFDWTQIIRK RGIVYIGLDA MTDTEISSAV GNSMFSDLVS VCGSIYKHGF EHGMLEGKAN 
VMPKVCLHAD EFNELMGDEF LPMVNKSGGS GMQITAYTQS RGDIEARLGN TAKARQVEGN 
FNNLIMLRVK EKETAELLTN QLPEVEIAQI MTVSGASDSS DTESSVDFTS NTQDRISMLR 
VPMLEPGHIT SLPKGQAFCL LDGGQLWKVR FPLPVEDDED MPENLQALTR EMDKNYHTAE 
NWWA