Gene Maqu_4206 details

Gene Information

• Locus tag: Maqu_4206
• ID: 4653390
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Marinobacter aquaeolei VT8
• Kingdom: Bacteria
• Replicon accession: NC_008738
• Strand: +
• Start bp: 103691
• End bp: 105556
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 639809633
• Product: type II secretion system protein E
• Protein accession: YP_956972
• Protein GI: 120536914
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAAGC AACGAATCCC GCTAGGCACG GTTCTGCTGA ACAAGGGCTT GATCGATAAA 
CGAACCCTCG AAAAAGCGCT GAAGATGCAA AAGCAGAAAA AGAATGAAGG CCGAGCAATT 
CCGCTGGGTG AGCTGCTGGT GCGCGCGGGA AAAATCACCA AAGAACAGCT GGAAGATGCA 
CTCAATCGGC AAAGTAAGCG GACAACAGAA GTTCTGCGCA GCCGATATGA AATCGATGAG 
ATACACGGAC AGCTGACGAT CCAGAGCCTC GACACAACAA CGGGGAAGCC GTTTGTTGAG 
GAAGCATACT CGAATGCAAT CCAGGTCGCC GAAAACCTCA AGAATGAGCC GGTAATCCTC 
GTGACGCCTG AGTTCCAGGC GGAGGCTCGA AACGTAATGA TGACAATCCG TCAGCGCGTT 
CTCGGAGCCT ACGGCAACAG TAATGGTCAG CCGGCACTCC CCCAGATTCT GAAAGTCACC 
CCCGATCTCC TTGATCTGTA TCGCACGAGC GTTCACGACC CCGCGCAGAG CGCCCCGAAA 
TCAGATGTTG AGAGTGAGTT CGAGGTTCTC GTCAAAAAAG CTTACGAGAT GGGGGCCGTT 
GATCTTCACT TCTTCCGGAA AGTAGATGTT TGCACCGTTC GCCTTCGGAT TAACGGCTCA 
CTCAGAACCT TTGCGGAATG GAGCCCCGAA AGAGCGGATA AAATCATCAG TGTTGGGTTC 
CAGAGCTTTG GTAAAGGCTC AAAATATAGC AATTGGAACC AACGGCAGCG ACAGCGAATC 
CGAATCAAGA TCCGTTACAA CCAGCACATC ACGCTGGATT GCCGGTACGA ACACGCGCCC 
GGTGACGATG GGGCCTATCA TACGTGTGTC CGGATACTTG GAAATGATAA GAGGGAGGTC 
AGCAAGCAAA TTGACTTGTG CGATCTCGGG TTTACGCGCA AACAGCATTA TGCACTTGAA 
GCGGCGGTGA GCGAGCCTTC CGGTCTGGTC ATTCTTGCCG GGCCCACCGG CTCAGGTAAA 
TCAACGACCA TGGCCGGCCT GATCAAATTC ATCAACCAGA ATAACGATGT CAACGTGTTG 
ACGGTTGAAA GCCCCATTGA GCGCGAATTA CCCGCCTTTC AGACCAGCGT AAGCGATGAT 
GAAGAAGGCA ACCAAAATGA GTTTGCCCAT GCGATTAAGT CCATGCTTCG CCGCGACCCC 
GATGTCGGCA TGGTTGGAGA AATCCGAGAT CACATGAGCG CATCAGCAGT CGCTAGCGGT 
GTTCAAACTG GTCACATTAT GCTGAGCACG GTACACGCCC AGTCAGCCAT CGAGATCGTT 
GAACGCTTGG CAAGCCCGGC CATGAAGCTG ACGCCGGACA CGATCGGCTC CCCCTCATTT 
GTTAATGCCC TGGTATTTCA AATGCTGGTC CCAACTCTGG ATCCCAAATC AAAGGCCCGC 
CTAACCCGCG AGAACCTGGA TGACTACATG GAACCGCGAC AGAGAGAGCG CTTTCTAACC 
CTCTTTCCGG ATTTCCATCA GAAAGAAATC TATGTCCGCG GCTCAAGCGA TCAGCATCCG 
GAAGGCGTCA ATGGTATGAC AATTTGCGCC GAAATCGTCA TTCCTGATGA TCGAATGCGA 
AGCCATTTCC GCCGCCTTGA ACTGGCAGAC GCTCTGCGAT ACTGGAAGTC CTTGGGCGTG 
GGCGAGGCCA ACAAACCCCT CGATGAGCGA TTGACCGGCC TAACAGCATC GGAGCACGCA 
ATCCTGAAAG TAGAGCAAGG GCTGGTGGAT CCCCGAGACC TGGAAGCATA TTTCGGCCAC 
ATGAATATCC TCGCTGCGAA GCGCAAAGAT GTAGCGGCTA ATCTCGATAG AGCGGAGGCC 
GCGTAA 

 

Protein sequence

MSKQRIPLGT VLLNKGLIDK RTLEKALKMQ KQKKNEGRAI PLGELLVRAG KITKEQLEDA 
LNRQSKRTTE VLRSRYEIDE IHGQLTIQSL DTTTGKPFVE EAYSNAIQVA ENLKNEPVIL 
VTPEFQAEAR NVMMTIRQRV LGAYGNSNGQ PALPQILKVT PDLLDLYRTS VHDPAQSAPK 
SDVESEFEVL VKKAYEMGAV DLHFFRKVDV CTVRLRINGS LRTFAEWSPE RADKIISVGF 
QSFGKGSKYS NWNQRQRQRI RIKIRYNQHI TLDCRYEHAP GDDGAYHTCV RILGNDKREV 
SKQIDLCDLG FTRKQHYALE AAVSEPSGLV ILAGPTGSGK STTMAGLIKF INQNNDVNVL 
TVESPIEREL PAFQTSVSDD EEGNQNEFAH AIKSMLRRDP DVGMVGEIRD HMSASAVASG 
VQTGHIMLST VHAQSAIEIV ERLASPAMKL TPDTIGSPSF VNALVFQMLV PTLDPKSKAR 
LTRENLDDYM EPRQRERFLT LFPDFHQKEI YVRGSSDQHP EGVNGMTICA EIVIPDDRMR 
SHFRRLELAD ALRYWKSLGV GEANKPLDER LTGLTASEHA ILKVEQGLVD PRDLEAYFGH 
MNILAAKRKD VAANLDRAEA A