Gene Mvan_6075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_6075 
Symbol 
ID4643305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp6489535 
End bp6490659 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content63% 
IMG OID639809539 
Productputative inner membrane protein translocase component YidC 
Protein accessionYP_956833 
Protein GI120407004 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0706] Preprotein translocase subunit YidC 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
[TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0948503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.176118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGTTTA ATTGGTTCAG CCTCGACATC ATCTATTACC CGGTGTCGGC GATCATGTGG 
GTTTGGTACA AGGCTTTCGC CTTCCTGATC GGGCTCATTC CCGGTGTCGA CGGGCCGTCG
AATTTCTTCG CCTGGGCGCT GTCGGTGATG TTCCTGGTGT TCACGCTGCG CGCGATTCTG
TACAAGCCGT TCGTGCGGCA GATCCGGACC ACCCGTCAGA TGCAGGAACT CCAGCCTCAG
ATCAAGGCGC TGCAGAAGAA GTACGGCAAG GACCGTCAGC GGATGGCGCT GGAGATGCAG
AAGCTTCAAC GCGAACACGG GTTCAACCCG ATCCTCGGCT GCCTGCCGAT GCTCGCGCAG
ATCCCGGTGT TCCTCGGGCT CTATCACGTG TTGATGTCCT TCAACCGGAC GCAGACCGGC
ATCGGGCGGC TCGGGCTGTC GGTTGAGGAG AACCGCAGTC TGCCCAACTA CTTCTTCAGC
GCGACGGATG TGGGCCACTT CCTGGATGCG AACCTGTTCG GCGCGCCCCT GGGTGCCACG
ATGATCCAGC AGCACGGGCT GGACGCGTTC ACGGAGTTCA ACCGGTTGTC GGTGATCGTC
GTCGGCGTCC CGATCATGAT CATGGCCGGC ATCGCGACCT ACTTCAACAG CCGAGCCTCG
GTGGCACGCC AAAGCCCCGA GGCGGCCGCC AATCCACAGA CCGCGATGAT GAACAAGCTG
GCGCTGTACG TGTTCCCGCT CGGCGTCGTC GTCGGCGGTC CGTTCCTTCC GTTGGCGATC
ATCCTGTACT GGTTCGCCAA CAACATCTGG ACGTTCGGTC AGCAGCACTA CGTGTTCGGG
ATGATCGAGA AGGAAGAAGA GCAGAAGAAG CTCGAAGCCA TCGAACGCCG TGCCGCTAAT
GCGCCGGCGC CCGGCGCCAA GCCCAGCCGG AAGAAGAAGG CCGGGACCGA TTCGGCTGTT
GCGGGACCCT CCGACGGTGC CGCCGGAGCC GAGAGTGCGG GCATCGACGA GGCTCCCTCG
GAAACGCCGC CGGCGGCCGA GAGCCCCACG ACATCTGCAG CGCAGGGCGG GGCGAGCAAT
CGCACCCCGA GGCCCGGCGC GCGGCCCAAG AAGCGGAAAC GTTGA
 
Protein sequence
MSFNWFSLDI IYYPVSAIMW VWYKAFAFLI GLIPGVDGPS NFFAWALSVM FLVFTLRAIL 
YKPFVRQIRT TRQMQELQPQ IKALQKKYGK DRQRMALEMQ KLQREHGFNP ILGCLPMLAQ
IPVFLGLYHV LMSFNRTQTG IGRLGLSVEE NRSLPNYFFS ATDVGHFLDA NLFGAPLGAT
MIQQHGLDAF TEFNRLSVIV VGVPIMIMAG IATYFNSRAS VARQSPEAAA NPQTAMMNKL
ALYVFPLGVV VGGPFLPLAI ILYWFANNIW TFGQQHYVFG MIEKEEEQKK LEAIERRAAN
APAPGAKPSR KKKAGTDSAV AGPSDGAAGA ESAGIDEAPS ETPPAAESPT TSAAQGGASN
RTPRPGARPK KRKR