| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_6047 |
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| Symbol | |
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| ID | 4644023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 6457119 |
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| End bp | 6458915 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639809512 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_956806 |
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| Protein GI | 120406977 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.166994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.759317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTGCA TGCGGGTACT GCGCCCATCC GTGAAGAGTC TCGTCCTCGC ACTGATCATC
GGGATGGTCG CGGCGATGGG GCTGGCCGCA CCGGCGGGCG CGCAAGTCGA CCAATGCACA
CCGCCGGGCA TCGAGAGCGC CAGCGCCCTG CCCACCAACC TTGCCGCCGC AGCTGCCGGG
CCCGCGGCTG ACAAGTACAC CACCGCCACG GTCAAACCCC TGGCTTCGGT TGACCTGAAC
GCACTCGGAC TGACCCAGCC GGGCACGCTG ACGGTCGGCA CCCTGTCCGA CGCGCCGCCG
AGCATCTGCA TCGACTCGGC CGGCCAGTAC ACCGGCTTCG ACAACGAGCT GCTCAAGGCC
GTCGCCGAGA AGCTCGGCCT CCGGGTCAAC TTCGTCGGCA CCGAGTTCTC CGGGCTGCTG
GCGCAGGTCG CCGCCCGCCG CTTCGACGTC GGATCCTCGT CGATCACCAC GACCGACGCC
CGCCGCCGCA CCGTCGGTTT CACCAACGGT TACGACTTCG GGTACTTCTC GCTCGTCGTC
CCGAAGGGGT CGGCGATCAC CGGGTTCGAG AAGCTGGCGC CGGGGCAGCG CATCGGCGTC
GTACAAGGCA CCGTGCAGGA GGCCTACGTC ATCGACACGC TGGGGTTGCA GCCGGTGAAG
TTCCCCGACT ACAACACCGT CTACGCCAGC CTCAAGACCG GCCAGATCGA CGCGTGGGTT
GCCCCGTCGC AGCAGGCGCA GGGCACCGTG CAGCCCGGCG ATCCCGCCGA CATCATCGAA
AACACCTTCA GCTTGGACAA TTTCATCGCC TGGGCGGTCG CCGGTGACAA CCAGCCGTTG
ATCGACGCGC TGAACTCCGG ACTGGACGCG GTGATCGCCG ACGGCACCTG GTCCCGGCTC
TACACCGACT GGGTGCCGCG CGCCGTGCCA CCGGGCTGGA AGCCCGGATC CAAGGCCGCA
CCCGCGCCCG AGCTTCCCGA CTTCGCCGCG ATCGCCGCAC AGAACCAGAG CGCGCAGGGC
CCCACTGCCC CGGTCCAACC GAAATCGACG CTGTCCCAAC TGGCCGCCTC GTTTCTGGAC
TGGGATCTCT ATAAGCAGGC GATCCCGGAC CTGTTCAAGA CGGGGCTGCC CAACACCCTG
ATCCTGACCG TCGCGGCGAG CATCATCGGG CTGATCCTGG GTATGGCGCT GGCGATCGCC
GGCATCTCGA AATCGCGGTG GCTGCGCTGG CCCGCGCGCA TCTACACCGA CATCTTCCGG
GGACTGCCCG AAGTCGTGAT CATCCTGTTG ATCGGCCTCG GCGTCGGGCC GGTCGTCGGG
CACCTCACCG GCAACAACCC GTTCCCGCTG GGCATCGCCG CGCTGGGCCT GATGGCGGCG
GCGTATGTGG GCGAGATCTT CCGGTCCGGC ATCCAGAGCG TCGACCCCGG GCAGCTGGAA
GCCTCCCGCG CACTGGGATT CAGCTACCCG ACCTCGATGC GGTTGGTCGT GGTACCGCAG
GGGGTCCGGC GGGTGCTGCC GGCACTGATG AACCAGTTCA TCTCGTTGCT GAAGGCATCC
TCTCTGGTGT ACTTCCTCGG CCTGATCGCC AACCAGCGTG AGCTCTTCCA GGTCGGCCGG
GATCTCAACG CGCAGACCGG GAACCTGTCG CCGCTCGTGG CGGCGGGGCT GTTCTACCTG
GCGCTGACGA TTCCGCTGAC ACACCTGGTG AACTTCATCG ACACCCGGCT GCGCCGCGGC
CGAAAGCCCG ACGAAAAGGA TCCGCTGGTG CTCGCCACCT CTCAGGAGAT GAACTGA
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| Protein sequence | MSCMRVLRPS VKSLVLALII GMVAAMGLAA PAGAQVDQCT PPGIESASAL PTNLAAAAAG
PAADKYTTAT VKPLASVDLN ALGLTQPGTL TVGTLSDAPP SICIDSAGQY TGFDNELLKA
VAEKLGLRVN FVGTEFSGLL AQVAARRFDV GSSSITTTDA RRRTVGFTNG YDFGYFSLVV
PKGSAITGFE KLAPGQRIGV VQGTVQEAYV IDTLGLQPVK FPDYNTVYAS LKTGQIDAWV
APSQQAQGTV QPGDPADIIE NTFSLDNFIA WAVAGDNQPL IDALNSGLDA VIADGTWSRL
YTDWVPRAVP PGWKPGSKAA PAPELPDFAA IAAQNQSAQG PTAPVQPKST LSQLAASFLD
WDLYKQAIPD LFKTGLPNTL ILTVAASIIG LILGMALAIA GISKSRWLRW PARIYTDIFR
GLPEVVIILL IGLGVGPVVG HLTGNNPFPL GIAALGLMAA AYVGEIFRSG IQSVDPGQLE
ASRALGFSYP TSMRLVVVPQ GVRRVLPALM NQFISLLKAS SLVYFLGLIA NQRELFQVGR
DLNAQTGNLS PLVAAGLFYL ALTIPLTHLV NFIDTRLRRG RKPDEKDPLV LATSQEMN
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