| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_6023 |
|---|
| Symbol | |
|---|
| ID | 4643949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 6430092 |
|---|
| End bp | 6431195 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639809489 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_956783 |
|---|
| Protein GI | 120406954 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTCC TGACCATCCA GTGCCTAGAA AAGCTCTTCG ACCGCCACCA CGGTCGCGGT
TCGGGTCTGC ACCGAATCGA TTTGGACGTC GAGCGCGGGG AATTCATTAG TCTCTTGGGT
CCGAGCGGCT GCGGCAAGAC GACGACGCTC CGGTGCATAG CCGGTTTAGA GACACCGGAT
CAAGGTCGAG TCGAGCTGGA CGGCAAGGTC CTCTTCTCGT CAGACCGGTC GTCGGGGCGC
CCACCGATGA ACGTTGCGCC GGAGCGTAGA GGCATTTCCA TGGTGTTCCA GGACTACGCA
CTCTGGCCGC ATATGGACGT ATCCAAGAAC GTCGCCTTTG GTCTCAAGGG CACCGGTCTA
ACTCGTGCCG AAATCTCCGC CGAGGTGCAG CAGGCACTTC GCAGCGTGCG GTTGTGGGAT
CACCGTGATA AGCGAGTCTC GCAGTTGAGT GGAGGTCAGC AGCAGCGCGT TGCACTCGCG
CGTGCATTAG CGCCGACGCC CAAAATAATT CTATTCGACG AACCGCTGAG CAATCTAGAT
AGCCAACTTC GAGAGGACAT GCGGCTCGAG ATCCGAGATC TGCAGCAGCG GATGGGGCTG
ACCGCAATCT GGGTGACACA CGATCAAGAG GAGGCGTTGG GGCTGTCGAC CCGTGTCGTG
CTGATGAACG AAGGCCGAGT CGAACAGATC GGGCGGCCAG TCGATCTATG GACCGAGCCG
TCTTCACCTT TTGTAGCGAG CTTTCTCGGC ACAACAACTC GCATTACGGG CGAAGTCGTA
GCAACGGAAG CTGGTTTAGC ACTTTCGATT CCGCAGGCTC GGCCGATACC GCTACCCGAC
GGATCACTGC TGAGACCAGG GGATCGAGCG TCAATCTTCG TCAGGCCTGG TGCAATCGCG
CTCTGCGATC AATCCTTGAC TACGCAAGAC ACCTGGAAGG TTCCGGTGTT GGGGCAGATG
TTTCACGGTG AGCACACGAT GATCACGGTC TCGTTTGGTG GGGTGCACCT GAGGATCAGG
AGTGATAAAT TTCTTGACCC TCAACCGGAA TTTCTTGACA TACAGGTGGA TTCTTCGAGG
CTTATGGCCT TCCGCGATGA ATGA
|
|---|
| Protein sequence | MAFLTIQCLE KLFDRHHGRG SGLHRIDLDV ERGEFISLLG PSGCGKTTTL RCIAGLETPD
QGRVELDGKV LFSSDRSSGR PPMNVAPERR GISMVFQDYA LWPHMDVSKN VAFGLKGTGL
TRAEISAEVQ QALRSVRLWD HRDKRVSQLS GGQQQRVALA RALAPTPKII LFDEPLSNLD
SQLREDMRLE IRDLQQRMGL TAIWVTHDQE EALGLSTRVV LMNEGRVEQI GRPVDLWTEP
SSPFVASFLG TTTRITGEVV ATEAGLALSI PQARPIPLPD GSLLRPGDRA SIFVRPGAIA
LCDQSLTTQD TWKVPVLGQM FHGEHTMITV SFGGVHLRIR SDKFLDPQPE FLDIQVDSSR
LMAFRDE
|
|---|
| |