| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5979 |
|---|
| Symbol | |
|---|
| ID | 4643681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 6375812 |
|---|
| End bp | 6376567 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639809447 |
|---|
| Product | CHAP domain-containing protein |
|---|
| Protein accession | YP_956741 |
|---|
| Protein GI | 120406912 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3942] Surface antigen |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCA AACTGACTGC TCGACTGGGA CTTCTGCTCA TCTGCACCGC TGTCGGACCA
CTTCTCGGCG CACCAACCGC GTCGGCGGAC CGAACCGTGA CCGTCAACAC CGGTGCGGGA
AACATCAACG TGCGCTCGGG CCCGTCGACC GGATCTCAGC TGCTGAGCAC CATTCCCAAC
GGTACCCGGG TGGCCATCAG CTGCCACGTT CGTGGCGAGG TTTACCGTGG CGGTCCTTAT
GGACGGCCCA CCGACATCTG GAATCAACTC GCCGGCGGGG GATACGTCAC CGACGGGATG
CTGGAAACCG GTTCGAACGA TCCCGTCGTC CCGACCTGCG GGGGCCCGCC GGCCCCTGCA
CCGACGTCGG GCCGGTCGAT GGGACAAACC CGCACTACCA ACCCCGGTTT CGCCGGGTAC
TGCACCCGGG GCGCCTACGC CAAATGGTTC GAAGCTAGCG GACACCGGTT CTACCCAGCG
CTGAGCGGAA ACGCTAGAAA CTGGGCCAAC TCCGCGCGAG CCGCTGGGTG GACCGTGGTC
GACGACGCAC AGCCCCGCTC GATCGTCGTG TTCCAGCCCG GCGTCCATGG CGCCCACCGC
GCCGACGGCC ATGTGGCCTG GGTGGATTCG GTATCGCAGC GTCCCGACGG CCGGTACATC
ACCCTGACCG AGATGAACGG TTCCGCCGGC TTCAACCGGT GGTCGAGTCG AACAATCAAG
GACATCCCGG GAATGGCTTA CATCCTGCTG CCGTAG
|
|---|
| Protein sequence | MNTKLTARLG LLLICTAVGP LLGAPTASAD RTVTVNTGAG NINVRSGPST GSQLLSTIPN
GTRVAISCHV RGEVYRGGPY GRPTDIWNQL AGGGYVTDGM LETGSNDPVV PTCGGPPAPA
PTSGRSMGQT RTTNPGFAGY CTRGAYAKWF EASGHRFYPA LSGNARNWAN SARAAGWTVV
DDAQPRSIVV FQPGVHGAHR ADGHVAWVDS VSQRPDGRYI TLTEMNGSAG FNRWSSRTIK
DIPGMAYILL P
|
|---|
| |