Gene Mvan_5958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5958 
Symbol 
ID4643660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp6358190 
End bp6359401 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content64% 
IMG OID639809428 
Producttransposase, IS111A/IS1328/IS1533 
Protein accessionYP_956722 
Protein GI120406893 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.369394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTCG TCGGCGACGA CTGGGCTGAA GACCATCACG ATGTGTATCT GATGGACGAA 
TCCGGCCAAC GACTGGCAGC CCGGCGATTA CCCGAAGGGC TGTCGGGCAT TCGGGCCCTA
CACGAACTGA TCGCCGGCTA CGCCGAGGAG CCCGACCAGG TCATAGTCGG TATCGAGACC
GATCGTGGCC TGTGGGTTTC GGCGTTAGCG GCGGCCGGTT ATCGGGTGTG GGCGATCAAC
CCGATGGCCG CGGCTCGGTA TCGCGATCGT CATCATGTCT CGGGGGCCAA GTCCGACGCC
TCCGATGCCA AGCTCTTAGC GGATCTGGTC CGTACCGACC GGCACAATCA CCGTGAGATC
GCAGGTGACC GCCCGCAGGC CGAGGCGATC AAAGTCTTGG CCCGTTCCCA TCAGAGCTTG
ATCTGGGCGC GCACGCGGCA CGCCAACATG CTGCGCAGCG GGCTGCGGGA GTACTACCCC
GCGGCCTTGG AGGCCTTCGA TTCACTCACC GACAGCGACG CACTGGCAAT CCTGGGGCGT
GCACCGACCC CTGACCAGGG CGCTCGATTG AGTCTGGCCA AAATCGGATC GGCTCTCAAA
TCTGCTGGGC GGCAACGCAA CATCGAATCA CGCGCCGCTG AGATACAAAC CGCGCTCCGG
GGTGAGCACC TCACTGCGCC GCCAGCAGTA GCCGCCGCCT TCGGGGCTAC CACAGCAGCT
GCGGTGCACG TCATCACGGC GCTCAATGAC CAGATCGCCG AACTCGAAAC CGCGCTGGCC
GACCATTTTG AGGCGCACCC GGACGCCGAC ATCTACCGCT TCCTGCCAGG ACTTGGTGTC
ATCCTCGGCG CCCGGGTGCT CGGTGAGTTC GGGGACGACC CGAACCGCTA CACCACTGCC
AAGTGTCGCA AGAACTACGC CGGAACATCA CCGTTGACCA TCGCGTCGGG CCGAAAGCGT
GCCGTGCTGG CCCGCCACGT CCGTAACAAA CGCCTCTACG ACGCACTCGA CCAATGGGCG
TTCTGCACAC TGACTCGAAG TCCCGGTGCG CGGGCCTACT ACGACCAACA CCGCGCTGCC
GGCGACACCC ACCATCAAGC GCTACGCGCA CTGGCAAACC GACTCGTCGG CATCCTCCAC
GGCTGCCTCC GCCACCACAG CCCCTACGAC GAACACAAAG CCTGGGCACA CCGAAAACCC
GCAGCTGCTT GA
 
Protein sequence
MIFVGDDWAE DHHDVYLMDE SGQRLAARRL PEGLSGIRAL HELIAGYAEE PDQVIVGIET 
DRGLWVSALA AAGYRVWAIN PMAAARYRDR HHVSGAKSDA SDAKLLADLV RTDRHNHREI
AGDRPQAEAI KVLARSHQSL IWARTRHANM LRSGLREYYP AALEAFDSLT DSDALAILGR
APTPDQGARL SLAKIGSALK SAGRQRNIES RAAEIQTALR GEHLTAPPAV AAAFGATTAA
AVHVITALND QIAELETALA DHFEAHPDAD IYRFLPGLGV ILGARVLGEF GDDPNRYTTA
KCRKNYAGTS PLTIASGRKR AVLARHVRNK RLYDALDQWA FCTLTRSPGA RAYYDQHRAA
GDTHHQALRA LANRLVGILH GCLRHHSPYD EHKAWAHRKP AAA