| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5928 |
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| Symbol | |
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| ID | 4647539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 6322166 |
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| End bp | 6325423 |
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| Gene Length | 3258 bp |
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| Protein Length | 1085 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639809403 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_956697 |
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| Protein GI | 120406868 |
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| COG category | [K] Transcription
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain)
[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
[COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.9439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAGC TCGTTCCGAC GGGAACAGTG ACGTTGCTTC TAGCCGACGT CCAGGGATCA
ACCCAGCTTT GGGAGACCCA GCCCGAGACG ATGACTGCCG CCGTTGCGCA GCTGGATCGA
ACACTGACCG ACCTCGTCTC CGACCATGAC GGAGTCCGTC CGGTCGAGCA GGGTGAAGGC
GACAGCTTCG TCGTTGCGTT CACCCGTGCC TCCGACGCCG TGGCGTGCGC GCTCGCCCTG
CAACGGGCGC CGCTGGCGCC GATCCGGCTG CGCATCGGAG TGCACACCGG TGAGGTGCGG
CTGCGCGACG AGGGAAACTA CGTGGGCCCG ACCATCAACC GCACCGCCCG GCTAAGGGAG
CTCGCGCACG GAGGCCAGAC CGTGCTATCC GGCACCACAA GCGACCTGGT GGCGGACCTG
CTTCCTGATG GTGGGTGGCT GAGTGACTTG GGCACCCACC GTCTGCGGGA CTTGCCCCGA
CCGGAACGGG TGGTGCAGCT GTGTCATGCC GACCTAAGCA ACGAGTTCCC GCCGCTGCGC
GCCCGGGAAG AAATTGGTGT GCAACGTCTT CCGGCCCAGC TCACCAGTTT CGTGGGGCGC
GTCGACGACA TGGCCCAAGT CCGCGGGCTC ATGGATGCCA ACCGGTTGGT CACCCTCACC
GGTGCCGGCG GGGTGGGGAA GACGCGCCTG GCGACCCAGG TCGCCGTTGC CGTGGTTGAG
GGATACCCGG GCGGCGTCTG GTATGTGGAT CTGGCGCCGA TCACCGACCC GGCGCTGGTG
GCGATCACCG TGGCGCGGGC ATTGGGGCTG CCGGACCAAC CCGGCCGCTC AACCGTGGAC
ACAATTGTGC GATTCATCGC CGATCGGCGG ATGCTTGTAG TGCTGGATAA CTGCGAGCAC
CTGCTCGACG CGTGCGCCAC TCTGATTGAT GCGCTGTTGG GTGCGTGCCC GGCGCTGGCC
ATGTTGGCGA CCAGCCGCGA GCCCATCGCG GTGGCCGGCG AGCAGACTTG GCGGGTCCCC
CCGCTGGCCC TCGACGACGA CGCGATCGAG CTGTTCACCG ACCGCGCCCG CCGGGCGCGT
CCCGACTTCA TCATCAGCGC CGACGACGCC GCCGCGGTGA GCGAGATCTG TCACCGGCTC
GACGGCATGC CGCTGGCCAT CGAACTCGCC GCGGCCCGGG TGCGCGCCCT GTCGCTGACC
GAGATCGTGG ACGGCCTACA TGACCGCTTC CGCCTGCTGA CCGGTGGATC ACGCACCGCG
GTGCGCCGCC AACAAACCCT GCGGGCTTCG GTCGACTGGT CGCATGGACT GCTCACCGAC
CCGGAACGAG TGCTGTTCCG GCGGCTGGCG GTGTTCGCGG GCGGCTTTGA CCTCGACGGC
GCCCAAGCGA TCACCGTCGA CGGTGAGGTG CACCGCTACG AAGTGGTCGA CCTGCTCACC
CTACTGGTGG ACAAGTCGTT GCTGATCGCC GAAAACACCG CTGGCCGAAC GCGATACCGC
CTCCTGGAGA CGGTGCGCCA GTACGCGCAG GAAAAACTGG GTGAATCCGG TGAGGCCGAC
ACCCTGCGGG CGCGGCACCG CGACCACTAC ACGGCGCGCG CGGCCGAGCT GGACGCTCCC
TCGGTAGCCG GCCATGAACG CCGGCTCAAT CAGACCGACA TCGAGATGGA CAACCTACGG
GCCGCATTCG CGTGGAGCCG CGAGAACGCC AACACCGATC ACTCGCTCTT GCTGGCATCC
TCACTGCACC CGCTGTGGCG AGCCCGCGGC CGCCTGCAAG AAGGGCAGGC CTGGTTTGAC
GCCGCCCTGA CCGATTACGA GGCCCGCCCC GGAGAGGCAG ACCCCGCAGT GTATGCGCGG
GCATTGGCAG ACCGGGCCTT CATGGACGGC CACGTGGGTA TCACTGACCG CCTGGATCAA
GCTCAGAAGG CGCTGGCTAT GGCGCGAGAC ATCGATGACC CGGCGCTGCT GGTCCGGGCA
TTGACCGCGT GTGGCGGCCT TGCCGCCTAC AACGCCGATG TTGCGCGGCC GTTGTTGGCC
GAGGCGGTCG ACCTGGCCAG GTCGATGGGC GACAAGTGGA TGTTGGCCGA AACCCTGGCC
TGGCAGGCGT ATGCAGCGCT GATGGGTGGG GGCGACCCGG TCGCGGCGCG CACGGCAGGT
GAGGAAGCAC GCGAGCTTGC CGATGAGATG GGTGACGGGT TCGTTTCGCG CATCTGTGGT
TGGCTCCTCG GCATTGCGCA TCACTTTCAA GGCGACCTCG ACGCTGCGCT AGCCCTGGCG
GACGGCGTGG TTAGCGAGTC CGACGTGGCG CACGACACGC TCAACGGCTG TTGCGGTGAG
CTCGTGTTGG CTCATTCGCT GGCCCAGCGC GGTGACACCG ATGCAGCTCG GGCAGCCGCC
CAGGTGTCCC TCAACGTCGC AGTGGAAGTC AGCCCGGTCC ACGCAGGCTT GGCGCACGCG
GCGCTGGCCG TCGCGAACCT GGCCGCCGGC GACGTGACGG CCGCCGAAGC CGCCAGCGAT
TCGGCAACGC GGTCCTTTGG TCCCAGCGAG GTGGCGGGCA TCCAGGATCC CAACGTCGCC
GCGCAGATCG CCTGCACACG CGGTGATTTG GACACGGCGC GTAGCCTGGT CGACGGCGCT
GTGTCAATCA CCCGGGGCGT GCACCGCGCG AGCGCGCTCA CTACGCGTGC CCGCATCGCG
ATCGCCCAAG GCGACCCTGA GCAGGCCGAA CGCAACGCCC ACGACGCGCT GAGCTTGGCA
GCCGGTGTCG GGGCTCGCCT GGAGGTTCCT GACACACTCG AGTGCCTCGC ACGCGTTGTC
GGGGACGGCG GCAGCCATCA TGAAGCAGCG AGGCTCTGTG GCGCGGCAGA AGCCATCCGG
GGCAGAACCG GAGCTGTACG GTTCAGGATC TACGACGCCG ACCATGAAAC GACCGTCACA
ACGCTGCGTG ACGCATTGGG CGATAAGGCC TTTGAGGCCG CGTGGACCGA AGGCTCCGCT
ACGTCCATCA CAGAGGCGAT TGCATACGCA CAACGGGGTC GGGGAGAGCG CAAGCGCCCG
AGCAGTGGGT GGGCGTCACT GACACCCACC GAACTCGATG TGGTGGGGCT CGTCAGCGAA
GGCCTGAGCA ACAAGGACAT CGCCGCACGG CTGTTCGTGT CACCGCGCAC CGTGCAGACT
CACCTCACCC ACGTCTACAC CAAGCTCTGC CTCGCTTCCC GCGTGCAACT CGCCCAAGAA
GCGGCACGGC ACACCTGA
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| Protein sequence | MSELVPTGTV TLLLADVQGS TQLWETQPET MTAAVAQLDR TLTDLVSDHD GVRPVEQGEG
DSFVVAFTRA SDAVACALAL QRAPLAPIRL RIGVHTGEVR LRDEGNYVGP TINRTARLRE
LAHGGQTVLS GTTSDLVADL LPDGGWLSDL GTHRLRDLPR PERVVQLCHA DLSNEFPPLR
AREEIGVQRL PAQLTSFVGR VDDMAQVRGL MDANRLVTLT GAGGVGKTRL ATQVAVAVVE
GYPGGVWYVD LAPITDPALV AITVARALGL PDQPGRSTVD TIVRFIADRR MLVVLDNCEH
LLDACATLID ALLGACPALA MLATSREPIA VAGEQTWRVP PLALDDDAIE LFTDRARRAR
PDFIISADDA AAVSEICHRL DGMPLAIELA AARVRALSLT EIVDGLHDRF RLLTGGSRTA
VRRQQTLRAS VDWSHGLLTD PERVLFRRLA VFAGGFDLDG AQAITVDGEV HRYEVVDLLT
LLVDKSLLIA ENTAGRTRYR LLETVRQYAQ EKLGESGEAD TLRARHRDHY TARAAELDAP
SVAGHERRLN QTDIEMDNLR AAFAWSRENA NTDHSLLLAS SLHPLWRARG RLQEGQAWFD
AALTDYEARP GEADPAVYAR ALADRAFMDG HVGITDRLDQ AQKALAMARD IDDPALLVRA
LTACGGLAAY NADVARPLLA EAVDLARSMG DKWMLAETLA WQAYAALMGG GDPVAARTAG
EEARELADEM GDGFVSRICG WLLGIAHHFQ GDLDAALALA DGVVSESDVA HDTLNGCCGE
LVLAHSLAQR GDTDAARAAA QVSLNVAVEV SPVHAGLAHA ALAVANLAAG DVTAAEAASD
SATRSFGPSE VAGIQDPNVA AQIACTRGDL DTARSLVDGA VSITRGVHRA SALTTRARIA
IAQGDPEQAE RNAHDALSLA AGVGARLEVP DTLECLARVV GDGGSHHEAA RLCGAAEAIR
GRTGAVRFRI YDADHETTVT TLRDALGDKA FEAAWTEGSA TSITEAIAYA QRGRGERKRP
SSGWASLTPT ELDVVGLVSE GLSNKDIAAR LFVSPRTVQT HLTHVYTKLC LASRVQLAQE
AARHT
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