| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5925 |
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| Symbol | |
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| ID | 4647536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 6316311 |
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| End bp | 6319304 |
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| Gene Length | 2994 bp |
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| Protein Length | 997 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639809400 |
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| Product | WD40 domain-containing protein |
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| Protein accession | YP_956694 |
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| Protein GI | 120406865 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACC TCCCCGGAAC CGGCGCCCCG AATTCGACCC CACCAAGGCG GCCGGCAAGT
AGCGCTTGTC CTACAACACA ATCCGCGCCT GGAATGAGCG ACCAGCGAAG CGAGCCGTCG
GGGCTGAACA TCGGGCACAT CGGTAAGCGT GCCGCCCAGG TGGGTGGGCT GGCAGTTGCC
GCCTATGTCA TTACTGCCGT AGCCGCAGGG CACGGGGTGG CGGCCGCCGA CTCGGGGGAC
GCGGGCCCAG CTGGTTCGGT CACTTCTTCG GCGCAGCGTG ACAGCACGGA TGCGAACGCC
ACCGACAACG ACGAAAGCAC CACTCGCTCG TCGGCGCACA ACCGATCCGA CGCGGATGGA
TCTGAGGCAG CCGAGGCCGA GAACTCCTCG GATGACCGCC TGGACGTGGA CTCGTCTGCG
CCCGGGGACT CGGACAGGAC GCCGACGACG GACGAGCACC TGGACGCCGT GCCGGAGCCG
GACGCGGCCG TCGACCCCAC GAGCGACGCC GAAACCTCCG CCGACGAGTC GACAGACACG
CCGGCCTCCC CCTCCGATCA GCACCCGGTG CACTCAGACA CCGGCGAGGA ACTGCCTTCC
GCAGACGTCG ACGAAGCGAC GACCGACGTC GCGGCCCCGG CGGGTGCCGC CGAAACGCCG
ACAGCCGCCG AGACTGCGCA GACGTCCGAG CAGCAGCCGG CCCCTACGTC GGCCTCGTCG
CCCCAAGGCA CAGAAACGTC GATCGAGACA CCCACCGCTG CGGCAACGAG CGTCGTCACC
CTCGCGCCGA ACCCGACGAC TCCGCTGCGG GCGCCGATGG AGTGGAACCT GCTCGGTTGG
ATGCGGCGGA CGTTCTTCAA CCGACCGCCG ACCATCGACT ATGACGCCGG CTTGAACACT
CAAGACATGA GCAACGGCGT CATCACCGGC AACATCGGCG CCGTCGATCC TGATGGCGAC
CGCTTGACCT ACAAGCTGAT TGCGGGTCCG CAGTACGGCA CCGTGGTCAT CGACCCACTC
ACAGGGAACT TCACCTACAC GCCAACCTCA TACTTCGCCC AGCGCGGCGG CGCCGTCGGG
TTCACTGTCA GGGTCAGTGA CCACCGGCCC CATCTGCTGT CGTTCCTGTT CTCTCCGGAT
CGCGGCAGCC CGACAGCCCG GATCGCTGTC AACGTCGAGC CGTTGTCTGA CCCCGCGTCG
ACGCCGCCCT TGGAGGCATT CGAGGTCGAG AAGGTGATCG AGTTCGACCT GCCGGACGGT
GTCAAGGTCA CCGGCGCGGA TCTGAGCCCG GACGGCGAGC ACCTCATCCT CGAGGTCGAA
GTCGCCGACG GCAGCACCCA GATCGCCGTG ACCAACCTCG ATGGCGCTGA CTACCAATGC
ATTTCCTGTG GTTTGGTCCC TAACGCCACC AAAGCCAAGG CGCTTTACGA CAACCAGAGA
ATCTGGTTCG CAAGCACCAA CGGGCAGCAG TCCGCCGATG ATCCGCTCGG GGGAGCCGGA
GCCATCACCT ACATGGTGCT GGAGTGCGAG GGATCGATCC ACGCCTGTCA GAACCCCACC
GTCAAGAAGG TGAAGTTCCC ATCAGATCGA GGCCTGTTGG GGCTGCTGCC CGTGCAGAAT
CGAGAGGCCA AGCCCGACCC GTACGGCGAG TACGTGACGT GGACCGAGAA CACGATTTTC
AACGGCCCGC GGATGAGCAT CGCCAAGCTG GTCGCCACCG CCGACGGATA CAAACTCGTC
GAGCAACGCA TCTTCAGTCC GCAGTGGTAC GAGGGCACCG ACTACGCCAC GGACTTCGGC
AACGCCACGC GATTCTACGA GGGGGCAAGT TGGCACGCGG GCGGGCGATA TCTGAAGTAC
CAGACGACCA CCACCGGCCT GAATTACGAC ATCTACCTGC TGGACACCGC CACCGGTGAG
CGGCGTCAAC TCACCACCGA CCTCGACTAC AACGAATCCG GTGACATCTC TCCCGACGGC
CGATCGGTCT ACTTCAGCTC GGCGCGCGGC CTCGACCGGA TGGACGTGTT CACCGCCCTG
GAGCGGCCGT CGTTGATCGA CAGCGCGGCG TTCCCTCAGA TCGGGCGCGT GAGCCTGTGG
AACAACCGGC GCTCCATGAA CGAGCCCTGG TTGATGAACC TCGACGCCGG CCAGCAGCAG
GGCGGCTACT CGGGTCAGCC CATCGTCATC GACCCAGACT GGACGATTCG CGGGTGGAGC
TGGTTCCCCG ATTCGACGCG TGCCCTGATC AACGAGCAGC AGCGTCCGGA CACCGTGACC
GGGGGAGGAG CACCCGACAC CCCCTGGCGC GTCAGCATCA TCAGCTTCCC CTCTCGGGAA
GCAACGACCC CGCTCCCGCC CGTGCACCAG GATCCCGACG CCATCGCCGA GTGGTCGGTA
CCGGTCAAGG AGTACAAGCC GATGATGGGC CGCCAGGACA CCCGGGTCCT CAAGGGCACG
CATTCCGGAA CCGCGACTCT GCGATACAGC GGGATCTTCG CCTTCGGCAC GTACTCGGTG
ACCTACAAGA ATTACTCGGA CGACGGCAAG ACCTTCATCA ACGGCACCGA GAAGGTCAAG
ATCAAAAATC CGATGGGTGA CTCCGTATGG AGCGCCGATC TGACCAGCAC CGGTGAACGC
ACCGGCTATC TGAAGGGCAA GATCAACATC GGCAAGGGCA ACGCGTTTTC GGGCGAGGTG
GCCTCCGAGA TCAATGGCAT CACCTACAGC GGCGTACCGA CCCAGGCGGA CTTCCCGACC
ATCGAGCAGC CTCAACTCGC GGTCTCGGCA TCCGGTGACA GACTGCGGGT GACCGCGACG
GTGGCTGAGG ACAGCCAGGC CCGACCGGTG CGCGGTGCGA CCGTGACCAT TGGGTCGGTC
ACGGCGACCA CCGACGAGCA GGGCTACGTC CAGCTACCGT TCGCCCCCGG CGACACCGTC
ACGGCGAACG CCGGCGGCTT CCGTTCGGCC AGTCACCAGG TGCCGTTCAT CTGA
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| Protein sequence | MADLPGTGAP NSTPPRRPAS SACPTTQSAP GMSDQRSEPS GLNIGHIGKR AAQVGGLAVA
AYVITAVAAG HGVAAADSGD AGPAGSVTSS AQRDSTDANA TDNDESTTRS SAHNRSDADG
SEAAEAENSS DDRLDVDSSA PGDSDRTPTT DEHLDAVPEP DAAVDPTSDA ETSADESTDT
PASPSDQHPV HSDTGEELPS ADVDEATTDV AAPAGAAETP TAAETAQTSE QQPAPTSASS
PQGTETSIET PTAAATSVVT LAPNPTTPLR APMEWNLLGW MRRTFFNRPP TIDYDAGLNT
QDMSNGVITG NIGAVDPDGD RLTYKLIAGP QYGTVVIDPL TGNFTYTPTS YFAQRGGAVG
FTVRVSDHRP HLLSFLFSPD RGSPTARIAV NVEPLSDPAS TPPLEAFEVE KVIEFDLPDG
VKVTGADLSP DGEHLILEVE VADGSTQIAV TNLDGADYQC ISCGLVPNAT KAKALYDNQR
IWFASTNGQQ SADDPLGGAG AITYMVLECE GSIHACQNPT VKKVKFPSDR GLLGLLPVQN
REAKPDPYGE YVTWTENTIF NGPRMSIAKL VATADGYKLV EQRIFSPQWY EGTDYATDFG
NATRFYEGAS WHAGGRYLKY QTTTTGLNYD IYLLDTATGE RRQLTTDLDY NESGDISPDG
RSVYFSSARG LDRMDVFTAL ERPSLIDSAA FPQIGRVSLW NNRRSMNEPW LMNLDAGQQQ
GGYSGQPIVI DPDWTIRGWS WFPDSTRALI NEQQRPDTVT GGGAPDTPWR VSIISFPSRE
ATTPLPPVHQ DPDAIAEWSV PVKEYKPMMG RQDTRVLKGT HSGTATLRYS GIFAFGTYSV
TYKNYSDDGK TFINGTEKVK IKNPMGDSVW SADLTSTGER TGYLKGKINI GKGNAFSGEV
ASEINGITYS GVPTQADFPT IEQPQLAVSA SGDRLRVTAT VAEDSQARPV RGATVTIGSV
TATTDEQGYV QLPFAPGDTV TANAGGFRSA SHQVPFI
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