Gene Mvan_5874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5874 
Symbol 
ID4647395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp6259869 
End bp6260606 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content66% 
IMG OID639809351 
ProductUbiC transcription regulator-associated domain-containing protein 
Protein accessionYP_956645 
Protein GI120406816 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.166435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACC ACCATCTGGA GATGATCAAC AGGTATGCCG GCCAGCCGCT GTACCGGCAA 
CTCAGCGACG TCCTCGAGAC GCGTCTGGCG CAGCGGGCCA AACCAGGCGA CAAGCTGCCG
AGCGAAGCCG AGCTGTCGCA GGAATTCGAG GTCAACCGGT TGACTGTGCG GCGGGCGCTC
GACGAACTCA ACCAGCGTGG CCTGATCGAA ACCGTCCGCG GCAAGGGCTC ATTCGTCGCG
ACGCCGCGGA TGCGTTACGA CATCTCGGCC GGCCGGGACG CCAGCTTCAC CCGCACCATG
CTCGAGCTCG GACACCGCGT CGGTATCACC GTGCTGGGGT CGGAGATCAC CGAGTCATCG
GAGCTGGCAG CGGAATTGCG CACGGACGGG GAACTGTTCG TGTGCACCAC GCTGCGGCTC
GTCGACGACG AGCCCTGGTC GGTGACGATG ACGTCGATCC CCACCGCGAG ATTCCCGCGG
CTGGCTCAGC AGTGGGCAGG GGACACCTCG TTGTTCGACT ACCTGCACGA CAACCACGGC
GTGCGCATGC AACGGGCATC CCGCACGTTC GCCGCCAGTC TGGCCGAACC CGCTGAAGCC
GAACACCTTC GGATCAGGGT GGGTGCCGCG ATCCTGGAGA TGAGGGGGCT GAACATCGAC
GAGGACGGCA TCCCGGTGGC CGCCGTGCGG CACCGGTTCC GCGGCGACCA TGTGCAGTTC
ACGGTGGACC TCACGTGA
 
Protein sequence
MMNHHLEMIN RYAGQPLYRQ LSDVLETRLA QRAKPGDKLP SEAELSQEFE VNRLTVRRAL 
DELNQRGLIE TVRGKGSFVA TPRMRYDISA GRDASFTRTM LELGHRVGIT VLGSEITESS
ELAAELRTDG ELFVCTTLRL VDDEPWSVTM TSIPTARFPR LAQQWAGDTS LFDYLHDNHG
VRMQRASRTF AASLAEPAEA EHLRIRVGAA ILEMRGLNID EDGIPVAAVR HRFRGDHVQF
TVDLT