Gene Mvan_5863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5863 
Symbol 
ID4647383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp6248514 
End bp6251342 
Gene Length2829 bp 
Protein Length942 aa 
Translation table11 
GC content69% 
IMG OID639809339 
ProductATPase, P-type (transporting), HAD superfamily, subfamily IC 
Protein accessionYP_956634 
Protein GI120406805 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0474] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGTGA CTGTTGACGC GACGCGCGAT CCGTCGACAC GGGACGGCGC CGAGGTCGCC 
CGCCATCTGG CGGTTGATCC CGCGACGGGT CTCGCGTCGG CGGAGGCAGA ACGTCGCCTA
CAGCGCGACG GCCCCAACGA ATTGCGGGCC AAGGCGCCGG TGCCGATGTG GCGGAAGGTC
GTTCGTCAAT TCCAGGATCC GCTGATCTAC CTGTTGCTCG TCGCGGTCGC GATCTCCACG
GCGGCCTGGC TGGCCGAGGG GGCGACCGGC GCACCGATCG ACGCACTGGT CATCTCCGCG
ATCGTCGCGC TCAACGGCGC CCTCGGGTTC ATCCAGGAGA GTAGGGCCGA AGCGGCTGTC
AAAGCGCTGC AGTCGATGAC CGCTGCGACC TCGACGGTGC TGCGGGAGGG TCAACTGCGT
ACGGTGCCGT CGCGCGAACT GGTGTGCGGC GACATCCTGG TGCTGAACGA GGGCGACGCC
GTCGGTGCCG ATGCCCGGCT GCTGACGGCG GCCGCGCTGC GCCTGTCCGA GGCGTCACTG
ACCGGCGAGA GCGAGCCGGT GACGAAGACC GCCGCCACGT TGCCGGACCA CCTGCCGCTC
GGCGACCGCA AGGACATGGT GTTCCGCGGC ACCTCGGTGG TCCAGGGAGT GGGCCGCGCG
GTTGTCACCG CCACCGGGAT GGACACCGAG GTCGGTTCGA TCGCCGAGAT GCTGGAGGCC
ACCAGGGAGG ACCCCAGCCC CCTGCAGAAG GAGATCGCGA GCGTCAGCAG GCTGCTGGGC
CTCACGGTCA TCGTCATCGC CGTGGTGGTC ATGATCGTCA CAGCGCTGGT CAACGAGATC
TCCACATTCG GTCATCTGGT CACCGTCTTG CTGCTGGGCG TATCGCTCGC GGTCGCGGCG
GTCCCCGAGG GGCTGCCCGC CATCTTGTCC GTCGTCCTGG CCATCGGGGT GCAGCAGCTG
GCCCGGCGCA ACGCTGTGGT CAAGAAGCTG CACTCGGTGG AGACCCTGGG TTCGGCCACC
GTCATCGCGT CGGACAAGAC CGGCACACTG ACCAAGAACG AGATGACGAT CCAGTGCATC
CGCACCGCCT CGGGCGAGGT CGAGCTGACC GGCGCCGGGT ACCGCCCCGA GGGCACCGCG
CTGGCCGGAG GCCGGGAGCT GTCCGATCCG GCGCTGACGC GGGAGGCGGG GATGGTGCTC
GCCGGCGGTT GCCTGGCCAA CAACGCACAG CTGACATCGC GCGACGGTGA GTGGCAGATT
CAGGGCGACC CGACCGAGGC GGCGTTCCTG GTGGCCGCCC ACAAGCTCGC GGGCACCGTC
GACCGTGCCC GGCAGTTCGA GCGGCGGGGC GAGATCCCGT TCACGTCCGA GCGAAAGATG
ATGTCCACGT TGGTCTCCGG CGGCGACGCG GGCACCGCGG TGGTGGTCAA GGGTGCTCCC
GACGTGCTGC TGTCGCGCTG CGTCGCGGTG CAGGTCGGCG ACGAGGTGGT TCCGCTCGAT
CCCGTTCGGC GGGCGGCCGC GTCCGCCGAC GTCGAAGAGC TGTCCGCGCA GGCGTTCCGC
ACCCTCGGCG TCGCCTACCG CTGGGTCGAC GACCCGGACA CCTGCGGCCC GCTCGACGTG
GCTGACGAAC AGAACCTCGT CTACGTGGGC GTCGCCGGGA TCATCGACCC ACCCCGCCCC
GAGGTGGCCC AGGCCGTCGC CGAGGCCCGC CGGGCGGGGG TGCGGGTCAT GATGATCACC
GGCGATCACC CCACCACCGC GGCGCGCATC GCCGAGGACC TCGGCATCGT CGGGCGCGGG
GCCCCGGCGG TCACCGGGGC CGAACTCGAC ACCCTCTCCC CCGGCCAGCT TCAAGACGTG
ACCGCCACGA CGTCCGTCTA CGCCCGCGTC GCCCCGCGCA ACAAACTCCA GATCGTCGAC
GCGCTCCAGG CCCGCGGCGA GGTAGTGGCG ATGACCGGCG ACGGCGTCAA CGACGCCCCC
GCGCTGAAGT CCGCCGACAT CGGTGTGGCG ATGGGGATCA CCGGGACACA GGTGACCAAG
GAAGCCGCGA AGATGATCCT CGCCGACGAC AACTTCGCCA CCATCGTCGC GGCCGTCCGC
CAGGGCCGGG CCATCTTCGA CAACATCAAG AAGTTCCTGC GCTACCTGCT GTCGTCGAAC
ATGGGCGAGG TCTTCACCGT GTTCTTCGGC GTGGTGTTCG CCGGCTTCAT CGGGATCACC
ACCACATCGG GGGAGGCCAT CGTCGTGCCA CTGCTGGCCA CCCAGATCCT GTGGATCAAT
CTCGTCACCG ACTCCGGTCC CGCCCTCGCG ATGGGCGTGG ACCCTGAGAT CGACGACGTG
ATGTCCCGGC CTCCTCGGCG GCCGACCGAT CGACTCATCG ATCGCGAAAT GTGGCGGGGC
ATCGTGTTCA TCGGCCTGGT CATGGGTTTC GCCACGCTGT TGACGATGGA CATCTTCCTG
CCGGGCGGTC TGGTCGAGGG ATCGGACTCG CTGGACGTGG CGCGCACCGC CGGGTTCACC
ACGCTGGTGT TCGCCCAGTT CTTCAACGTC TTCAACTCGC GCTCGGAGAC CACCAGCGCA
TTCCGCCACC TGTTCAGCAA CGGCTGGCTG TGGGCGTCCG TGGGCCTTGG TGTGGCGCTG
CAGATCGCGG TGGTCCAATT ACCGCTGTTA CAAACCGCTT TCGGCACGGT GTCGATGGAC
CTGGCGCATT GGGCGGTGGC GCTCGCGATG GCCTCGACGG TGCTGTGGTT CGATGAGCTC
CGCAAGCTGG CGCTGCGGGC GCTCCGGCGC TCAGGAACCC CAGCGACAGA ACGGACGAGC
CGGTCATGA
 
Protein sequence
MEVTVDATRD PSTRDGAEVA RHLAVDPATG LASAEAERRL QRDGPNELRA KAPVPMWRKV 
VRQFQDPLIY LLLVAVAIST AAWLAEGATG APIDALVISA IVALNGALGF IQESRAEAAV
KALQSMTAAT STVLREGQLR TVPSRELVCG DILVLNEGDA VGADARLLTA AALRLSEASL
TGESEPVTKT AATLPDHLPL GDRKDMVFRG TSVVQGVGRA VVTATGMDTE VGSIAEMLEA
TREDPSPLQK EIASVSRLLG LTVIVIAVVV MIVTALVNEI STFGHLVTVL LLGVSLAVAA
VPEGLPAILS VVLAIGVQQL ARRNAVVKKL HSVETLGSAT VIASDKTGTL TKNEMTIQCI
RTASGEVELT GAGYRPEGTA LAGGRELSDP ALTREAGMVL AGGCLANNAQ LTSRDGEWQI
QGDPTEAAFL VAAHKLAGTV DRARQFERRG EIPFTSERKM MSTLVSGGDA GTAVVVKGAP
DVLLSRCVAV QVGDEVVPLD PVRRAAASAD VEELSAQAFR TLGVAYRWVD DPDTCGPLDV
ADEQNLVYVG VAGIIDPPRP EVAQAVAEAR RAGVRVMMIT GDHPTTAARI AEDLGIVGRG
APAVTGAELD TLSPGQLQDV TATTSVYARV APRNKLQIVD ALQARGEVVA MTGDGVNDAP
ALKSADIGVA MGITGTQVTK EAAKMILADD NFATIVAAVR QGRAIFDNIK KFLRYLLSSN
MGEVFTVFFG VVFAGFIGIT TTSGEAIVVP LLATQILWIN LVTDSGPALA MGVDPEIDDV
MSRPPRRPTD RLIDREMWRG IVFIGLVMGF ATLLTMDIFL PGGLVEGSDS LDVARTAGFT
TLVFAQFFNV FNSRSETTSA FRHLFSNGWL WASVGLGVAL QIAVVQLPLL QTAFGTVSMD
LAHWAVALAM ASTVLWFDEL RKLALRALRR SGTPATERTS RS