Gene Mvan_5854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5854 
Symbol 
ID4647374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp6239437 
End bp6240660 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content66% 
IMG OID639809330 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_956625 
Protein GI120406796 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAGG CACCCTGTCC CCCATCCCTT CGCGTCACGG CGGACCGGCT CCGGACGGCG 
GCGGTCGCCG TGGCGGTGCT GTTGATCGCC GCTGCGTGCT CCTCGACCCC GGCCGCTGCG
CCCGCACCCG ACGTCATCAC GGACAAGGGG ACCCCGTACG CGGATCTACT GGTCCCGAAG
CTGCAGGCGT CGGTCACCGA TGGGGCGATT GGTGTCCCGG TGGATTCGCC GGTGACCGTG
ACCGCCGGCG ACGGAGTTCT CGGGCAGGTC TCGCTGACCA ACGAGGCCGG CGTAGTGGTC
GACGGACAAT TGAGCCCCGA CGGCACCTCC TGGTCGTCGG CCGAACCGCT GGGCTACAAC
AAGCAATACA CGCTTCAGGC CGAAGCCCTC GGGCTGGGCG GGGTGACCAG CACCAGCGCC
ACCTTCGAAA CCCATTCGCC CGACAACCTG ACCATGCCGT ACGTGGCGCC CAACGACGGA
GAAACCGTCG GCGTCGGTCA GCCGATCACC ATCCGCTTCG ACGAGAACAT CACAAACCGG
CTGGCGGCCC AGCAGGCCGT CACCGTGACC ACGGACCCGC CCGTCGAGGG CGCCTTCTAC
TGGCTCAACA ACCGGGAAGT CCGTTGGCGC CCAGCGCAAT ACTGGAAGCC AGGCACCACC
GTCGAAGTCG AGGTCAAGGC CTATGGTGTC GAGTTCGGCG ACGGACTGTT CGGCCAGGAC
GACGCGTCCA CCCGCTTCAC CATCGGCGAC GAGGTCATCG CGACCGCCGA CGACGCCACC
AAGATGCTGA CCGTTCGACG CAACGGAGAG GTTGTCAAGA CCATGCCCAT CTCGATGGGC
AAGGCCAAGA CACCGACGGA CAACGGCACC TACATCATCG GCGACCGCTA CTCCTTCCTC
GTGATGGACT CGTCCACCTA CGGTGTTCCC GTCAACTCAC CCGACGGGTA TCGCACCGAG
GTGGAATGGG CCACGCAGAT GTCCTACAGC GGCATCTACG TGCATTCGGC GCCGTGGTCG
GTGGGCAGCC AGGGCGTCGC CAACGTCAGC CACGGATGCC TCAACGTGAG CCCGGCCAAC
GCCCGCTGGT TCTACGACAA CACCAGGCGC GGCGACATCG TCGAAGTCGT CAACACGACC
GGCCCCACCC TGTCGGGCAC CGACGGACTC GGGGACTGGA ACATCCCGTG GGACCGGTGG
AAAGCCGGAA ACGCCAACGA CTGA
 
Protein sequence
MPQAPCPPSL RVTADRLRTA AVAVAVLLIA AACSSTPAAA PAPDVITDKG TPYADLLVPK 
LQASVTDGAI GVPVDSPVTV TAGDGVLGQV SLTNEAGVVV DGQLSPDGTS WSSAEPLGYN
KQYTLQAEAL GLGGVTSTSA TFETHSPDNL TMPYVAPNDG ETVGVGQPIT IRFDENITNR
LAAQQAVTVT TDPPVEGAFY WLNNREVRWR PAQYWKPGTT VEVEVKAYGV EFGDGLFGQD
DASTRFTIGD EVIATADDAT KMLTVRRNGE VVKTMPISMG KAKTPTDNGT YIIGDRYSFL
VMDSSTYGVP VNSPDGYRTE VEWATQMSYS GIYVHSAPWS VGSQGVANVS HGCLNVSPAN
ARWFYDNTRR GDIVEVVNTT GPTLSGTDGL GDWNIPWDRW KAGNAND