Gene Mvan_5841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5841 
Symbol 
ID4643423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp6227434 
End bp6229080 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content70% 
IMG OID639809317 
ProductABC transporter-related protein 
Protein accessionYP_956612 
Protein GI120406783 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.334221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.657499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAA CGCTCGTCGC GAAGAACGTG GCAGGCGGGT TCGCCCATCG CACGCTCTTC 
GAAGGTGTCG ACCTGACCGT CGCCCCGGGC GACGTGGTCG GTGTCGTCGG CGCCAACGGC
GCGGGCAAGA GCACGCTGCT GCGGATCCTG GCCGGCGAGC TGGAGCCCCT CGACGGATCG
GTCGCCGTGG CACCGGCCGA CGCGTTCGTC GGGTGGTTGC CCCAGGAGCA CGAACGCGTC
CCCGGGGAGA CGGTCGCCGC CTACGTCGCC CGCCGTACCG GGTGCGCCGA AGCCACCCGC
GCCATGGACG CTGCCGCCGC GACCCTGGAC GACGCGGGTA ACGGGGCCGA CGCCTACTCC
GCCGCCCTGG ACCACTGGCT GGCCACCGGC GCCGCGGACC TCGACGAGCG GTTGCCGGCC
GTGCTCGCCG ACCTCGGCCT GGACTCCGAT GCGGTGCGGC CGGATTCGAC GCCGATGACG
GCGCTATCGG GCGGGCAGGC CGCGCGGGTG GGGCTGGCCG CCCTGCTGCT GTCGCGGTTC
GACATCGTCC TGCTCGACGA GCCGACCAAC GACCTCGACC TCGACGGGCT GGCCCGGTTG
GAGCGCTTCG TCTCCGAGCT TCGCGGTGGG GTGGTGCTGG TCAGCCACGA CCGGGAGTTC
CTGGCCCGCA CCGTGACTCG CGTGCTGGAA CTGGACTTGG CGCAGAACAC CACCACCGTG
TTCGGCGGCG GGTATGAGAG CTATCTCGAA GAACGCGCGG TCAACCGCCG GCATCGGCGC
GAGCAGTACG AGGAGTTCGC CGACAAGAAG GCCGACCTGG TGGCACGCGC TCGCGTGCAA
CGGGAATGGT CCAGCCAGGG GACTCGCAAC GCGATCCGCA AGGCTCCCGA CAACGACAAG
ATCCGTCGGC GGGCGGCCAC CGAGTCCAGC GAGAAGCAGG CACAGAAGGT GCGCCAGATG
GAGAGCCGGA TCGCGCGGCT GGAGGAAGTC GAGGAGCCCC GAAAGGAGTG GACGCTGCAG
TTCACCATCG GGGAGGCGCC GCGGTCGAGT GCGGTGGTCG CGACGCTCGA CAACGCCGTT
GTGCGCCAAG GCGATTTCGT GTTGGGCCCG GTGGCGTTAC AGGTGGACGC CGGCGAGCGG
ATCGGAATCA CCGGGCCCAA CGGCGCGGGG AAATCGACCC TGTTGCGGTT GCTGTTGGGT
CGCCTGCTGC CCGACGAGGG CCGTGCGAGC ATGGGGGCGA GCGTCGAGAT CGGTGAAATC
GACCAGGCCC GCGCCTATTT CACCGGCCCC GAACGGCTTC TCGACCGCTT TGAGCAGCGG
GTGCCGGAAT GGCCGACCGC CGACGTGCGA ACGCTGTTGG CGAAGTTCGG TCTCGGTGCC
GACCATGTGG AGCGTGCCGT CGACGAGCTC TCGCCCGGCG AGCGCACGCG CGCCGGGCTG
GCGCTGCTGC AGGCCTGCGG CACCAATGTG CTGGTGCTCG ACGAGCCGAC CAACCACCTC
GACCTGCCCG CCATCGAGCA ACTCGAACAG GCCCTCGAAA GCTATGACGG TGCGCTGCTG
CTGGTGACCC ATGACCGCAG GATGTTGCAG AACGTCCGGT TGGACCGGTC GTGGCGGGTC
GAAAACGGTC AGGTCACCGA GCTGTAG
 
Protein sequence
MTATLVAKNV AGGFAHRTLF EGVDLTVAPG DVVGVVGANG AGKSTLLRIL AGELEPLDGS 
VAVAPADAFV GWLPQEHERV PGETVAAYVA RRTGCAEATR AMDAAAATLD DAGNGADAYS
AALDHWLATG AADLDERLPA VLADLGLDSD AVRPDSTPMT ALSGGQAARV GLAALLLSRF
DIVLLDEPTN DLDLDGLARL ERFVSELRGG VVLVSHDREF LARTVTRVLE LDLAQNTTTV
FGGGYESYLE ERAVNRRHRR EQYEEFADKK ADLVARARVQ REWSSQGTRN AIRKAPDNDK
IRRRAATESS EKQAQKVRQM ESRIARLEEV EEPRKEWTLQ FTIGEAPRSS AVVATLDNAV
VRQGDFVLGP VALQVDAGER IGITGPNGAG KSTLLRLLLG RLLPDEGRAS MGASVEIGEI
DQARAYFTGP ERLLDRFEQR VPEWPTADVR TLLAKFGLGA DHVERAVDEL SPGERTRAGL
ALLQACGTNV LVLDEPTNHL DLPAIEQLEQ ALESYDGALL LVTHDRRMLQ NVRLDRSWRV
ENGQVTEL