Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_5841 |
Symbol | |
ID | 4643423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 6227434 |
End bp | 6229080 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639809317 |
Product | ABC transporter-related protein |
Protein accession | YP_956612 |
Protein GI | 120406783 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.334221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.657499 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGCAA CGCTCGTCGC GAAGAACGTG GCAGGCGGGT TCGCCCATCG CACGCTCTTC GAAGGTGTCG ACCTGACCGT CGCCCCGGGC GACGTGGTCG GTGTCGTCGG CGCCAACGGC GCGGGCAAGA GCACGCTGCT GCGGATCCTG GCCGGCGAGC TGGAGCCCCT CGACGGATCG GTCGCCGTGG CACCGGCCGA CGCGTTCGTC GGGTGGTTGC CCCAGGAGCA CGAACGCGTC CCCGGGGAGA CGGTCGCCGC CTACGTCGCC CGCCGTACCG GGTGCGCCGA AGCCACCCGC GCCATGGACG CTGCCGCCGC GACCCTGGAC GACGCGGGTA ACGGGGCCGA CGCCTACTCC GCCGCCCTGG ACCACTGGCT GGCCACCGGC GCCGCGGACC TCGACGAGCG GTTGCCGGCC GTGCTCGCCG ACCTCGGCCT GGACTCCGAT GCGGTGCGGC CGGATTCGAC GCCGATGACG GCGCTATCGG GCGGGCAGGC CGCGCGGGTG GGGCTGGCCG CCCTGCTGCT GTCGCGGTTC GACATCGTCC TGCTCGACGA GCCGACCAAC GACCTCGACC TCGACGGGCT GGCCCGGTTG GAGCGCTTCG TCTCCGAGCT TCGCGGTGGG GTGGTGCTGG TCAGCCACGA CCGGGAGTTC CTGGCCCGCA CCGTGACTCG CGTGCTGGAA CTGGACTTGG CGCAGAACAC CACCACCGTG TTCGGCGGCG GGTATGAGAG CTATCTCGAA GAACGCGCGG TCAACCGCCG GCATCGGCGC GAGCAGTACG AGGAGTTCGC CGACAAGAAG GCCGACCTGG TGGCACGCGC TCGCGTGCAA CGGGAATGGT CCAGCCAGGG GACTCGCAAC GCGATCCGCA AGGCTCCCGA CAACGACAAG ATCCGTCGGC GGGCGGCCAC CGAGTCCAGC GAGAAGCAGG CACAGAAGGT GCGCCAGATG GAGAGCCGGA TCGCGCGGCT GGAGGAAGTC GAGGAGCCCC GAAAGGAGTG GACGCTGCAG TTCACCATCG GGGAGGCGCC GCGGTCGAGT GCGGTGGTCG CGACGCTCGA CAACGCCGTT GTGCGCCAAG GCGATTTCGT GTTGGGCCCG GTGGCGTTAC AGGTGGACGC CGGCGAGCGG ATCGGAATCA CCGGGCCCAA CGGCGCGGGG AAATCGACCC TGTTGCGGTT GCTGTTGGGT CGCCTGCTGC CCGACGAGGG CCGTGCGAGC ATGGGGGCGA GCGTCGAGAT CGGTGAAATC GACCAGGCCC GCGCCTATTT CACCGGCCCC GAACGGCTTC TCGACCGCTT TGAGCAGCGG GTGCCGGAAT GGCCGACCGC CGACGTGCGA ACGCTGTTGG CGAAGTTCGG TCTCGGTGCC GACCATGTGG AGCGTGCCGT CGACGAGCTC TCGCCCGGCG AGCGCACGCG CGCCGGGCTG GCGCTGCTGC AGGCCTGCGG CACCAATGTG CTGGTGCTCG ACGAGCCGAC CAACCACCTC GACCTGCCCG CCATCGAGCA ACTCGAACAG GCCCTCGAAA GCTATGACGG TGCGCTGCTG CTGGTGACCC ATGACCGCAG GATGTTGCAG AACGTCCGGT TGGACCGGTC GTGGCGGGTC GAAAACGGTC AGGTCACCGA GCTGTAG
|
Protein sequence | MTATLVAKNV AGGFAHRTLF EGVDLTVAPG DVVGVVGANG AGKSTLLRIL AGELEPLDGS VAVAPADAFV GWLPQEHERV PGETVAAYVA RRTGCAEATR AMDAAAATLD DAGNGADAYS AALDHWLATG AADLDERLPA VLADLGLDSD AVRPDSTPMT ALSGGQAARV GLAALLLSRF DIVLLDEPTN DLDLDGLARL ERFVSELRGG VVLVSHDREF LARTVTRVLE LDLAQNTTTV FGGGYESYLE ERAVNRRHRR EQYEEFADKK ADLVARARVQ REWSSQGTRN AIRKAPDNDK IRRRAATESS EKQAQKVRQM ESRIARLEEV EEPRKEWTLQ FTIGEAPRSS AVVATLDNAV VRQGDFVLGP VALQVDAGER IGITGPNGAG KSTLLRLLLG RLLPDEGRAS MGASVEIGEI DQARAYFTGP ERLLDRFEQR VPEWPTADVR TLLAKFGLGA DHVERAVDEL SPGERTRAGL ALLQACGTNV LVLDEPTNHL DLPAIEQLEQ ALESYDGALL LVTHDRRMLQ NVRLDRSWRV ENGQVTEL
|
| |