Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_5805 |
Symbol | |
ID | 4647843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 6193071 |
End bp | 6194723 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639809281 |
Product | putative GAF sensor protein |
Protein accession | YP_956576 |
Protein GI | 120406747 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTGGCGAG GCTGTGAGGA GGCAACGATG GGTGCGGGTC CGCCCCTCGA CGTCGACTCG GGCAACGACG CGGCATGGGC AGCGGTGCCC CATCCGGTGC TGGTGGTCGA TCGCGACGGA ATCGTCCGGA CGTCGAGCGG CTCGGCCCGC TCGCTACTGC CCGGGCTCAG CCCGGGTGTT GCACTCAAGG ACCTGGCGCC GTCCTGGCTG TCCGGAGCTC ATCAGCACCT GACGGCCGCG TCGGGCAGTG TGCACGGACG CGACTTCGAT GCACATCCCA CCCCGCTGCC CGGCGGCGAG GTGGCCTGGT GGCTGGTCGA GGACTCTGAC CGGTCGGCGC GCGACGCGCG CCGGGCGCTG ACCGTGGAGC GGGAGCGCGC AGCGTTTCTC GACGAGGCGT CCGCGGTCCT GATGGCCTCA CTGAACATCG ACCGGTGCAT GGAGGCGACG GTGCAGATGG CGGCCCGGCA CCTGGCCGAC GCCGCTGTTC TGGTGACCCC CGTCGCCGGC GGGCGAATCC CGGTGGTCTG TAGCGGAACC GACGGCACCG CGGAGCACCG GCGGGTCGAT GCCGATCCGT CGGACGTGGC GGGGCTGAGC GAGGCGTTGC GCGGTTTCCC GCCCGTACCG TCGCGCTGGA TCGATCCGGC GTCTGTACCG GGTTGGCTTG TGCCCGAGAG CTTTCCGGGG CCGGTGGGCT CCGTCGTCAT AACGCCACTG CCCGGCCACG GAGTCGCCGC CGGCGCGCTG GTCCTGCTGC GACGCACCTC CCAGACCGCA TTCAGCGAAG GCGAGGAGGT GTTCGCCCGG CTGTTCGCCG CGCGCGCAGG TGCGGCGCTG TCGGCGGCCC GGCTGTACGC CGAGCAGTCC GCGATCACCC GCACCCTGCT GCGGGATCTG CTGCCTCCGC AGCTGCACCG CCTCGACGGA ATCGAGCTCG CCGGCGGATA CCGGGCCTCC GAGGATCACG AGGCCGTCGG AGGCGACTTC TACGACGTCC ATCCCGCGGC CACACCCGAC GACGAAACCC TGGTGGTCCT CGGCGACGTC TGCGGAAAGG GGCTGGAGGC CGCCGTGCTG ACCGGCAAGA TCCGCAACAC CCTGATGGCG CTGTCCCCAC TGGCCCAGGA TCACGCGGGA GTGCTGCGAC TGCTCAACGC CGCGCTGCTC TGCGTCGACG ACTCCCGGTT CGCGACACTG GTGCTGGCGT CGGTGTCGCG GCGCGACGGG CAGGTGTTGC TTCGGCTCAC CAGCGCCGGG CACCTCGCCC CGCTGATCGT GCGCAACGAC GGCCGAGTCG AGGAAGCCGA GACCGCAGGC ACCCTGGTCG GGGTGATGCC TCAGATCAGG GCGCGCACCG TCGAGACATC CCTGGCCCCC GGGGAGACCT GCCTGCTCTA CACCGACGGC GTCACCGAGG CCCGCGGCGG CCCCCTCGGC ACCGACATGT TCGGCGAGCA GCGACTCTCG GCGGCGCTCG CGGAGTGCGC CGGCCTGCCG GCCGAGGCCG TCGTCGAGCG CATCATGATG CTCACCACCG GTTGGCTCAA CGAGCGCGCC CATGACGACA TCGCCGTGGT GGCCATCACC GCCCCGCGGC GCACGCACCT GAGCGCCGTC GACGGCCGCA CCGCCGGGAG GTACACCGCG TGA
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Protein sequence | MWRGCEEATM GAGPPLDVDS GNDAAWAAVP HPVLVVDRDG IVRTSSGSAR SLLPGLSPGV ALKDLAPSWL SGAHQHLTAA SGSVHGRDFD AHPTPLPGGE VAWWLVEDSD RSARDARRAL TVERERAAFL DEASAVLMAS LNIDRCMEAT VQMAARHLAD AAVLVTPVAG GRIPVVCSGT DGTAEHRRVD ADPSDVAGLS EALRGFPPVP SRWIDPASVP GWLVPESFPG PVGSVVITPL PGHGVAAGAL VLLRRTSQTA FSEGEEVFAR LFAARAGAAL SAARLYAEQS AITRTLLRDL LPPQLHRLDG IELAGGYRAS EDHEAVGGDF YDVHPAATPD DETLVVLGDV CGKGLEAAVL TGKIRNTLMA LSPLAQDHAG VLRLLNAALL CVDDSRFATL VLASVSRRDG QVLLRLTSAG HLAPLIVRND GRVEEAETAG TLVGVMPQIR ARTVETSLAP GETCLLYTDG VTEARGGPLG TDMFGEQRLS AALAECAGLP AEAVVERIMM LTTGWLNERA HDDIAVVAIT APRRTHLSAV DGRTAGRYTA
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