| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5803 |
|---|
| Symbol | |
|---|
| ID | 4647841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 6190806 |
|---|
| End bp | 6192107 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639809279 |
|---|
| Product | aminotransferase class-III |
|---|
| Protein accession | YP_956574 |
|---|
| Protein GI | 120406745 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.413013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCATAG AGGACTTCTG GCGGGACGCC GAGCACCATC TGGTGCGGTA CGGCGGGTCG
TTCATCCCCC GCATCATCGA ACGCGCCTGC GGAAGCTACG TCTACGACAG CGCCGGCACG
CCGATCCTGG ATTTCACCTC CGGGCAGATG AGCGCCGTGC TCGGCCACGC GCACCCCGAC
ATCGTGGCCA CGGTGTCCAC CGCGGTCGGC ACCCTCGACC ACCTCTACAG CGGAATGGTC
AGCCGGCCGC TGGTCGACCT CGCCACGACG TTGACGGCGA CGCTGCCCGC GTCACTGAGC
AAGGTGCTGT TGCTGACCAC CGGGGCCGAG TCCAACGAGG CGGCCGTCAA GATGGCCAAG
CTGTACACCG GTAAGTACGA GATCGTCTCG TTCGACCGGT CCTGGCACGG CATGACCTCC
GGCGCGGCGT CGGTGACGTT CAGTGCCGGG CGCCGCGGCT ATGGACCGCC GATGCCGGGA
AGCCTCACTC TGCCCACGCC GAACGCCTAC CGCTCACCGT TCCGGCATGC CGACGGCAGC
CATGACTGGC TGGCCGAGCT CGAGTACGGG TTCGCGATGG TCGACGCGCA GTCCGCGGGC
AGTCTGGCCG CCTGCCTGGT GGAGCCGATC CTGTCGTCGG GCGGGATCAT CGAGTTGCCA
CCGGGATACC TGCGCCGCCT CAAGGAACTC TGCGCCGAGC GCGGCATGCT GTTGATCCTC
GACGAGGCGC AGACCGGCAT CGCACGCACC GGCCTGATGT ACGCGTTCGA AAGGGACGGC
GTCGCACCGG ATCTGCTGAC GCTGTCGAAG ACGCTGGGCG CGGGCCTGCC GGTGGCCGCC
GTGGTCACCG GTGAGGAGAT CGAATCCACC TGCCATGACA GGGGATTCCT GTTCTTCACC
ACCCATGTCT CCGACCCGCT GGCGGCCGCC GTCGCGTGCA CGGTGCTCGA CGTCGTGGCA
CGGGACGGAC TGGTCGACCG GGCCGAACGA CTGGGCCGGC AGCTCGGCGA GCGGCTGACC
GACCTGAAGC ACCGGTACGA CCAGGTGGGT GACGTACGTG GCCGCGGATT GCTGCAGGGG
CTGGAGCTCG TCGTCGACAA GCAGACCAAG GAACCCGCCG ACGCGCTGGG GGCCGAGGTG
ACCGCCGCGT GCCTGGACCG CGGGCTGCAC ATGAACATCG TTCAGCTGCC TGGGATGGGT
GGCATCTTCC GCATCGCGCC TCCGCTGACG ATCACCGAGG CGGAACTGCA CAGCGGCCTG
GACATCCTGG ACGAGTCGCT GAAGGCGGTC CTGCAGCGTT GA
|
|---|
| Protein sequence | MSIEDFWRDA EHHLVRYGGS FIPRIIERAC GSYVYDSAGT PILDFTSGQM SAVLGHAHPD
IVATVSTAVG TLDHLYSGMV SRPLVDLATT LTATLPASLS KVLLLTTGAE SNEAAVKMAK
LYTGKYEIVS FDRSWHGMTS GAASVTFSAG RRGYGPPMPG SLTLPTPNAY RSPFRHADGS
HDWLAELEYG FAMVDAQSAG SLAACLVEPI LSSGGIIELP PGYLRRLKEL CAERGMLLIL
DEAQTGIART GLMYAFERDG VAPDLLTLSK TLGAGLPVAA VVTGEEIEST CHDRGFLFFT
THVSDPLAAA VACTVLDVVA RDGLVDRAER LGRQLGERLT DLKHRYDQVG DVRGRGLLQG
LELVVDKQTK EPADALGAEV TAACLDRGLH MNIVQLPGMG GIFRIAPPLT ITEAELHSGL
DILDESLKAV LQR
|
|---|
| |