| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5744 |
|---|
| Symbol | |
|---|
| ID | 4644199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 6133969 |
|---|
| End bp | 6134556 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639809220 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_956515 |
|---|
| Protein GI | 120406686 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02947] RNA polymerase sigma-70 factor, TIGR02947 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.893237 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.301453 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACACCG ACCGCCATGA CGACCAGCTC ACCGACCGCT TCGAGCGTGA CGCGATGCCC
CTGATCGCGG ATCTGTACCG GCACGCCATC AGGCTCACCC GCGACCACGC AGACGCCGAG
GACCTCCTGC AGGAGACCGC GGCCAAGGCC TATGCGGCAT TCGCCAGCTT TCAGGAGGGC
ACCAACCTCG TGGGCTGGCT GTACCGCATC ATGGTCAACA CCCACATCAG CGCCTACCGC
AGGCAGCAGC ACCGCCCGAC ACTGCAGTTC ACCGACGAGT TCACCGACGG CCAGCTGCTC
GCCCACAGCC AACGCGGCAG TTCGGCGACG CGGTCCACCG AGGAACTCGC GATCGCCCAC
ACAGGCGACC CGGCGATCGC CGCCGCAATG CGCTCGCTGC CCGAAAAGTA CCGCACAGCA
ATCTATTACG CCGATATCGA GGGCCGGAAG TTCCGGGAGA TCGCACTGTT GACGAACGTG
CCGATCGGGA CGGTGATGTC CCGGCTGCAC CGCGGCCGCA AACAGCTGCG CGACGCGCTG
TCCGATGTCG CCAGGGACCG CGGCTACCCG TTGCCCGAGG CCGCCTGA
|
|---|
| Protein sequence | MHTDRHDDQL TDRFERDAMP LIADLYRHAI RLTRDHADAE DLLQETAAKA YAAFASFQEG
TNLVGWLYRI MVNTHISAYR RQQHRPTLQF TDEFTDGQLL AHSQRGSSAT RSTEELAIAH
TGDPAIAAAM RSLPEKYRTA IYYADIEGRK FREIALLTNV PIGTVMSRLH RGRKQLRDAL
SDVARDRGYP LPEAA
|
|---|
| |