Gene Mvan_5739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5739 
Symbol 
ID4644194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp6129516 
End bp6130562 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content71% 
IMG OID639809215 
ProductABC transporter-related protein 
Protein accessionYP_956510 
Protein GI120406681 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.880097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTCG GTACGAACGG AGTCGGAGTC CAGCTCGACG AGCTGACCCG GGTGTACGGC 
ACCACCCGGG CGCTCGACGG CTTCACGCTG CACATCGAGC CCGGGGAGCT GGTCGCGCTG
CTGGGTCCGT CGGGGTGTGG AAAGACCACC GCGCTGCGCA TCCTCGCCGG CCTCGACGAG
GCCACCTCGG GCACGGTGGC GGTGGGCGGG GTCGACGTCA GCAAGGTGCC GGCCAACAAG
CGCGACATGG GCATGGTGTT CCAGGCCTAC AGCCTGTTCC CGCACCTGAC GGTGCTCGAC
AACGTCGCGT TCGGTCTGAA AATGCGCGGA AAAGCCAAGC GGGACAGGCT GTCCCGGGCC
GCCGACATGC TCGAGCTGGT GGGCCTCGGG GAGCTGGGCG GCCGCTACGC CAAGGAGCTC
TCGGGCGGGC AGCAGCAGCG GGTGGCGCTG GCCCGCGCGC TGGCGATCCG GCCCAGGGTG
CTGCTGCTCG ACGAGCCGTT GTCGGCGCTG GACGCCAAGG TCCGCACGCA GCTGCGCGAC
GAGATCCGGC GTGTCCAGCT GGAGGTCGGG ACGACGACGC TGTTCGTCAC CCACGACCAG
GAGGAGGCGC TGGCCGTCGC CGACCGGGTC GGGGTGATGA ACGAGGGCAG GCTCGAGCAG
CTGGCCGCGC CCGCCGACCT CTACGCCAAC CCGGCCACGC CGTTCGTCGC AGAGTTCGTC
GGGCTCAACA ACAAGGTGCC GGCCACCGTG TCGGGTGGCA GCGCCTCCCT GCTCGGGGTG
TCGGTGGCCG CGCTACCCGG TTCGGTCGAC GGGGCGGGGG TGGCGATGGT GCGGCCCGAG
TCGGTGACGG TGACCGCCGA CCCGGCCGGT GCGTCGACGG TCAGCTCGGT GTCGTTCCTC
GGTGCGATCT CGCGGGTGCA CATCATGGTG CCCGACGGTT CGACGGTCAG CGCTCAGATG
GCCAGCTCGG CCGCCCGGGG TTTCGCGCCG GGTGACCCGG TGACCGTCGG CATCGAACCC
CGCGGAGTGC TGGTCACACG TCCTTGA
 
Protein sequence
MSVGTNGVGV QLDELTRVYG TTRALDGFTL HIEPGELVAL LGPSGCGKTT ALRILAGLDE 
ATSGTVAVGG VDVSKVPANK RDMGMVFQAY SLFPHLTVLD NVAFGLKMRG KAKRDRLSRA
ADMLELVGLG ELGGRYAKEL SGGQQQRVAL ARALAIRPRV LLLDEPLSAL DAKVRTQLRD
EIRRVQLEVG TTTLFVTHDQ EEALAVADRV GVMNEGRLEQ LAAPADLYAN PATPFVAEFV
GLNNKVPATV SGGSASLLGV SVAALPGSVD GAGVAMVRPE SVTVTADPAG ASTVSSVSFL
GAISRVHIMV PDGSTVSAQM ASSAARGFAP GDPVTVGIEP RGVLVTRP