| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5620 |
|---|
| Symbol | |
|---|
| ID | 4644055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 5996799 |
|---|
| End bp | 5997629 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639809096 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_956391 |
|---|
| Protein GI | 120406562 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.841372 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCA TGGATGCCGC GGCGCAGTCC AGGACGTTCG CACGGGCGTG GGGCGATCTG
GTCGCCGGCT TCGGCAAGCG CGAGCTGTGG CTTCATCTGG GTTGGCAGGA CATCAAGCAG
CGGTACCGGC GATCGGTGCT GGGACCGTTC TGGATCACGA TCGCCACCGG GACCACCGCC
GTGGCGATGG GCGGCCTGTA CTCGATGCTG TTCAAACTGG AACTGTCCGA GCATCTTCCG
TACGTGACGC TGGGGCTCAT CGTCTGGAAC CTGATCAACG CCTCGATCCT CGAAGGCGCC
GAGGTGTTCA TCGCCAACGA GGGACTGATC AAGCAGCTGC CGACGCCGCT GTCGGTGCAC
GTCTACCGGC TGGTGTGGCG GCAGATGATC CTGTTCGCGC ACAACATCAT CATCTTCGTG
ATCATCGCGA TCGTCTATCC GAAGCCGTGG AACTGGGCCG ACCTGGCGGT CATCCCGGCA
CTGGGGCTGA TCGCGGCGAA CTGTGTCTGG GTCGCACTGT GTTTCGGCAT CCTGGCCACG
CGCTACCGCG ACATCGGGCC GCTGCTGGGC AGCCTCGTCC AGCTGTTGTT CTTCATGACC
CCGATCATCT GGAACGAGTC CACGCTGCAG GCCCAGGGTG CCGGGGGTTG GGCCAAGGTC
GTCGAGCTCA ACCCGCTGCT GCACTACCTG GACATCGTCC GCGCCCCGCT GCTGGGAGCG
GACCAGGAAC TGCGTCACTG GGTGGTGGTG CTGGTGCTCA CCGTCGTCGG GTGGACCTTC
GCCGCGCTGG CGATGCGGCA GTACCGTGCG CGCGTCCCGT ACTGGGTGTG A
|
|---|
| Protein sequence | MTIMDAAAQS RTFARAWGDL VAGFGKRELW LHLGWQDIKQ RYRRSVLGPF WITIATGTTA
VAMGGLYSML FKLELSEHLP YVTLGLIVWN LINASILEGA EVFIANEGLI KQLPTPLSVH
VYRLVWRQMI LFAHNIIIFV IIAIVYPKPW NWADLAVIPA LGLIAANCVW VALCFGILAT
RYRDIGPLLG SLVQLLFFMT PIIWNESTLQ AQGAGGWAKV VELNPLLHYL DIVRAPLLGA
DQELRHWVVV LVLTVVGWTF AALAMRQYRA RVPYWV
|
|---|
| |