Gene Mvan_5606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5606 
Symbol 
ID4644038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5983070 
End bp5984995 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content68% 
IMG OID639809079 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_956377 
Protein GI120406548 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2015] Alkyl sulfatase and related hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0740019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGCA AGCCGCCCAC AGCCACGATC GAAGCCGCGC ACCGGGAACA TCTCGCCACC 
CTCCCGTTCG ACGACACCAG GGATTTCGCC GACGCCGACC GGGGATTCAT CGCCGCGCAG
CAGCCGTGCG TCATCAAGGC CGCCGACGGA CGCGTGGTGT GGGACAACGA CGTCTACGCG
TTCCTCACGG GAGACGCCCC GACGACGGTG CACCCGAGCC TGTGGCGGCA GTCGACGCTG
GCAGCCAAGC AGGGTCTCTA CCGAGTGGTC GAAGGCATAT ACCAGGTGCG CGGGTTCGAC
CTGTCCAACA TCACGTTCGT CGAGGGTGAC ACCGGCATCA TCGTGATCGA CCCGCTGGTG
TCCACCGAGG TCGCCGCCGC CGCACTGGCG CTGTACCGCG AACACCGCGG CGATCGCGAG
GTCCGGGCGG TGATTTATAC CCACAGCCAT GTGGACCACT TCGGCGGGGT GCTGGGCGTG
ACCTCGCAGG CCGACGTCGA CGCCGGCAGG GTGGCGGTGC TGGCGCCCGA GGGGTTCACC
GCGCACGCGG TGCAAGAGAA CGTCTACGCC GGCACGGCGA TGACCCGCCG GGCCGCCTAC
ATGTACGGCA CGGTGCTCGA GCGGGGACCG AAGGGGCAGG TCGGCTGCGG GCTGGGGCAG
ACCCCGTCGA CGGGCGAGGT GGCGATCATC GTGCCGACGG TCGACATCCG CGAGACCGGC
GAGACGCACA CCATCGACGG TGTCGAGATC GAGTTCCAGA TGGCGCCGGG CACCGAGGCC
CCGGCCGAGA TGCACTTCTA CTTCCCGCGC TTCCGTGCGC TGTGCATGGC CGAGAACGCG
ACGCACAACC TGCACAATCT GCTGACGCTG CGCGGCGCTC TGGTTCGGGA TCCGCACGGC
TGGGCGGGCT ATCTCACCGA GGCGATCGAC ACGTTCGCCG ACCGTGCCGA CGTGGTGTTC
GCCTCGCACC ACTGGCCGAC CTGGGGTAAG GACCGGATCG TCGAATTCCT GTCCCTGCAA
CGGGATCTGT ACGCGTATCT GCACGACCAG ACGCTGCGGC AACTCAATCA GGGTTTCACC
GGCATCGAGA TCGCCGAAGC CTTCGCGATG CCGCCGGCGC TGGAGCGGGC GTGGCATGCG
CGCGGGTACT ACGGGTCGGT GAGCCACAAC GTCAAGGCCG TCTACCAGCG CTACATGGGG
TGGTTCGACG GCAATCCCGC CCGGCTGTGG CCCCATCCGC CGGAGGCCAT CGGCCCACGC
TATGTCGCGG CCATGGGCGG TATCGACCGC GTCGTCGAGC TGGCCAAGGG CGCCTTCGAT
GAGGGTGATT TCCGTTGGGC GGCAACACTT CTTGATCACG CTATGTTCAC CGACGAGAAC
CATGCCGGCG CCCGGGCGCT CTACGCCGAC ACCCTGGAGC AGCTGGCCTA CGGTGCCGAG
ACGGCGACCT GGCGCAACTT CTTCCTCGGC GGTGCCACCG AGCTGCGGGT GGGCAATTTC
GGCACGCCGA CGCAGACCAC GTCGACGTCG ATGGTCGCCC AGCTGACGCC GGAGCAGATG
TTCGACGTGC TGGCGATCAG CGTGAACGGG CCCCGCGCGT GGGATCTCGA CCTGGCCGTC
GACGTGACGT TCCTCACCGC GGCGAGCCGC GAATCGGGTA CCGCGGCGAG CCGCGGATCG
GGTACCGCCG CAACCAATTA CCGGCTGACG CTGCGCAACG GCGTGCTGGT CTACCGCGCG
GCGGCCGCCG ACGAGGCGTC GGCCCATGTG ACGATCCGGT TGGCGAACAA GCTGCGGCTG
CTCACCCTGG CGGCGGGAGA CACCACCTCG CCGGGGCTGG AGATCGCCGG GGACGCCGAG
GTTCTCACCG CGCTGGTGTC GGTGCTCGAC AAGCCGGACC CGAGCTTCAA CATCATCACG
CCCTAG
 
Protein sequence
MDSKPPTATI EAAHREHLAT LPFDDTRDFA DADRGFIAAQ QPCVIKAADG RVVWDNDVYA 
FLTGDAPTTV HPSLWRQSTL AAKQGLYRVV EGIYQVRGFD LSNITFVEGD TGIIVIDPLV
STEVAAAALA LYREHRGDRE VRAVIYTHSH VDHFGGVLGV TSQADVDAGR VAVLAPEGFT
AHAVQENVYA GTAMTRRAAY MYGTVLERGP KGQVGCGLGQ TPSTGEVAII VPTVDIRETG
ETHTIDGVEI EFQMAPGTEA PAEMHFYFPR FRALCMAENA THNLHNLLTL RGALVRDPHG
WAGYLTEAID TFADRADVVF ASHHWPTWGK DRIVEFLSLQ RDLYAYLHDQ TLRQLNQGFT
GIEIAEAFAM PPALERAWHA RGYYGSVSHN VKAVYQRYMG WFDGNPARLW PHPPEAIGPR
YVAAMGGIDR VVELAKGAFD EGDFRWAATL LDHAMFTDEN HAGARALYAD TLEQLAYGAE
TATWRNFFLG GATELRVGNF GTPTQTTSTS MVAQLTPEQM FDVLAISVNG PRAWDLDLAV
DVTFLTAASR ESGTAASRGS GTAATNYRLT LRNGVLVYRA AAADEASAHV TIRLANKLRL
LTLAAGDTTS PGLEIAGDAE VLTALVSVLD KPDPSFNIIT P