Gene Mvan_5605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5605 
Symbol 
ID4644037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5982217 
End bp5982993 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content68% 
IMG OID639809078 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_956376 
Protein GI120406547 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.679582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGCTT CGGGTGGATT CGCCGATCAG CTGTTCGACC TGACCGACCG GGTGGTGCTG 
GTCACCGGCG GCAGCCGCGG CCTGGGACGC GAGATGGCGT TCGCGGCGGC GCGCTGCGGA
GCCGACGTGG TCATCGCCAG CCGCAAGTAC GAGGCGTGTG TGGCCACTGC CGACGAGATC
GCCGCCGAGA CGGGACGGGC TGCGTTCCCG TACCAGGTGC ACGTGGGCCG GTGGGACGAG
CTCGACGGGT TGGTCGACGC CGCCTATGAC CGGTTCGGCA GAGTCGACGT GCTGGTCAAC
AACGCGGGCA TGTCACCGCT GTACGAATCC CTGTCGGCGG TCACCGAGAA GCTGTTCGAC
TCGGTGGTGA ACCTCAACCT CAAAGGCCCG TTCCGGTTGT CGGTGCTGGT CGGCGATCGC
ATGGTCGCCG ACGGCGGCGG CTCGATCATC AACGTCAGCA CCCACGGCTC GATTCGGCCG
CATCCGTCGT TCGTCCCCTA CGCGGCGTCC AAGGCGGGAC TGAACGCGAT GACCGAGGCC
CTGGCGCTGG CGTACGGGCC GACCGTGCGG GTCAACACGC TCATGCCCGG ACCGTTTCTC
ACCGACATCA GCGATGCCTG GACCTTCACC GACGGCGACA CAAACCCGTT CGGGCACAGC
GCCCTTCAAC GCGCGGGCCA GCCGGCCGAG ATCGTCGGCG CCGCGCTGTT CCTGATGTCG
GACGCGTCGA GTTTCACCAC CGGCTCGATC GTCCGAGCGG ACGGCGGCAT CCCCTGA
 
Protein sequence
MTASGGFADQ LFDLTDRVVL VTGGSRGLGR EMAFAAARCG ADVVIASRKY EACVATADEI 
AAETGRAAFP YQVHVGRWDE LDGLVDAAYD RFGRVDVLVN NAGMSPLYES LSAVTEKLFD
SVVNLNLKGP FRLSVLVGDR MVADGGGSII NVSTHGSIRP HPSFVPYAAS KAGLNAMTEA
LALAYGPTVR VNTLMPGPFL TDISDAWTFT DGDTNPFGHS ALQRAGQPAE IVGAALFLMS
DASSFTTGSI VRADGGIP