Gene Mvan_5600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5600 
Symbol 
ID4646144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5978027 
End bp5979139 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content68% 
IMG OID639809073 
ProductABC transporter-related protein 
Protein accessionYP_956371 
Protein GI120406542 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1125] ABC-type proline/glycine betaine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.763793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCAGCT TCGAGCACGT CACGAAGAGA TACCCGGACG GCACCGTCGC GGTCGACGAT 
CTGACGCTGG AGGTTCCGGA GGGCACCCTG GCCGTGTTCG TGGGCCCCTC GGGCTGCGGC
AAGACCACCT CGATGCGGAT GATCAACCGG ATGATCGAGC CGACTTCGGG CACGCTGACC
GTGGACGGCA GGGACGTCAC CAAGGTCGAC GCGGTGAAAC TGCGACTCGG AATCGGCTAC
GTGATTCAGA GCGCGGGCCT GATGCCTCAT CTGCGCGTCG TCGACAACGT CGCGACGGTA
CCTGTGTTGC GCGGCGAATC ACGGCGCAGC GCACGCAGAT CCGCGCTCGG GGTGCTGGAA
CGGGTCGGGC TCGATCCCAA GCTCGCCGAC CGGTACCCGG CCCAGCTCTC CGGCGGGCAG
CAACAGCGCG TCGGGGTGGC CCGGGCACTG GCCGCTGACC CCCCGATCCT GTTGATGGAC
GAGCCGTTCA GCGCCGTCGA TCCGGTGGTG CGCGAGGATC TGCAGACCGA GATCCTGCGG
CTGCAAAGCG AACTGCGCAA GACCATCGTG TTCGTCACCC ACGACATCGA CGAGGCGATC
AAGCTGGGCG ACAAGGTGGC GGTCTTCGGC CGCGGCGGAG TCCTCCAGCA GTACGACGCC
CCGGCACGGC TGCTGTCCAA CCCGGCCAAC GATGAGGTGG CCGAATTCGT CGGCGCCGAC
CGCGGTTACC GGGGGCTGCA GTTCTTCCAT GCCACCGGCT TGCCGCTGCA CGACATCCGC
CGCGTCGCCG AACCCGAGAT CAACGCCCTG ACATTGAATC CCGGGGACTG GGTGCTGGTG
ACCCGGACCG ACGGCACGCC GTACGCGTGG ATCAACGCCG CCGGCGTCGA ACTACATCGC
AATGGAAGTT CGCTCTACGA CAGCACCATT GCGGGCGGCT CGCTGTTCCA GCCGGACGGC
ACGCTGCGGC TGGCGCTGGA CGCGGCGCTG TCCTCGCCGG CCGGGCTCGG GGTGGCCGTC
GACGGTGCCG GTCAGGTGAT CGGCGGGGTG AGAGCCGACG ACGTGCTCGC GGCCCTGGAC
AAGCAGCGCG CCGCCAGGCA GGCGGAGGGC TGA
 
Protein sequence
MISFEHVTKR YPDGTVAVDD LTLEVPEGTL AVFVGPSGCG KTTSMRMINR MIEPTSGTLT 
VDGRDVTKVD AVKLRLGIGY VIQSAGLMPH LRVVDNVATV PVLRGESRRS ARRSALGVLE
RVGLDPKLAD RYPAQLSGGQ QQRVGVARAL AADPPILLMD EPFSAVDPVV REDLQTEILR
LQSELRKTIV FVTHDIDEAI KLGDKVAVFG RGGVLQQYDA PARLLSNPAN DEVAEFVGAD
RGYRGLQFFH ATGLPLHDIR RVAEPEINAL TLNPGDWVLV TRTDGTPYAW INAAGVELHR
NGSSLYDSTI AGGSLFQPDG TLRLALDAAL SSPAGLGVAV DGAGQVIGGV RADDVLAALD
KQRAARQAEG