Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_5576 |
Symbol | |
ID | 4647145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 5955824 |
End bp | 5957335 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639809048 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_956347 |
Protein GI | 120406518 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0765] ABC-type amino acid transport system, permease component [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAGAA CCCTTCAGCT GACGCCTCCG GGTTGCTACG GTCCGGCGAT GCGCTATCCC CGTACAGTCC TGCTTGCGGT GCTGGCCGCG ATCGCCGTGC TGCTGACGGC GTGCGGCTCG TCCGGTTCAG GGAACCCGGT GGAGTCCAGC GGAGTGCTGC GCGTCGGCAC CGAAGGCGTG TACGCCCCGT TCAGCTACCA CGACCCGGCC ACCGGTCAGC TCACCGGCTA CGACGTCGAC GTCGCACGCG CCGTCGGCGA GAAACTGGGC GTCAACGTCG AATTCGTGGA GACGCCGTGG GATTCGATCT TCGCCGCGCT GGAGGCCAAC CGGTTCGACG TCGTCGCCAA CCAGGTGACG ATCACCCCGG AGCGGCAGCA GAAGTACGAC CTGTCCGAGC CGTACTCGAT CGGCGAGGGC GTGATCGTCA CCCGCGCCGA CGACGACTCG ATCACCTCGC TGGCCGACCT GAGAGGCAAG CGGGCCGCGC AGAGCACCAC CAGCAACTGG GCCGGCGTCG CGCGCGACGC CGGCGCGCAG ATCGAATCGG TGGAAGGGCT CACCCAGGCG ATGGCCCTGC TCAGCCAGGG CCGGGTCGAC GTGGTGGTCA ACGACAGCCT CTCCATCTAC GCCTACCTCG CCGAGACGAA CGACACCGCG GTCAAGATCG CAGGCGCCAC AGGTGAAAAG AGCGAACAGG GCTTCGCCGC GCGCAAGAAC AGCGGTCTGC TGCCGGACCT CAACACGGCG CTCGAGGAGC TGAAGGCCGA CGGCACACTG GCCGAGATCT CGCAGAAATA CCTGAAGACC AACGCCTCCG GTGGTCAGGA CGCGCCGCAG ACCCAGCCCC GGTCGGCGCT GCGACTCGTG CTCGACAACC TGTGGCCGCT GGCCAGAGCC GCGCTGACGA TGACGATCCC GTTGACGATC ATCAGCTTCG TCATCGGTCT GGTGATCGCA CTCGGGGTCG CGCTGGCCCG GCTGTCGTCC AACGTCGTGT TGACCAACCT CGCCCGCTTC TACATCTCGG TGATCCGTGG TACGCCGCTG CTGGTGCAGC TGTTCATCGT GTTCTTCGCG CTGCCCGAAT TCGGCGTCCG GATCGACCCG TTCCCGGCGG CGGTGATCGC GTTCAGCCTC AACGTCGGCG GGTACGCGGC CGAGATCATC CGCTCGGCGA TCCAGAGCAT CCCGAAGGGG CAGTGGGAAG CGGCCGAGAC GATCGGCCTG AACTATGCGG GCACCCTGCG GCGGATCATC CTGCCGCAGG CCACCCGGGT CGCGGTGCCG CCGCTGTCGA ACACGCTGAT CTCGTTGGTC AAAGACACTT CCCTCGCGTC GACGATCCTG GTGACCGAAC TGCTGCGTCA GGCACAGATC ATCGCCGCCC CCACATTCGA GTTCTTCGCG CTCTACGGCA CCGCCGCCGT CTACTACTGG GTGATCTGCC TGGTGCTGTC GTTCGGCCAG GCCCGGTTCG AACGCCGACT GGAAAGGTAC GTGGCCAAAT GA
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Protein sequence | MSRTLQLTPP GCYGPAMRYP RTVLLAVLAA IAVLLTACGS SGSGNPVESS GVLRVGTEGV YAPFSYHDPA TGQLTGYDVD VARAVGEKLG VNVEFVETPW DSIFAALEAN RFDVVANQVT ITPERQQKYD LSEPYSIGEG VIVTRADDDS ITSLADLRGK RAAQSTTSNW AGVARDAGAQ IESVEGLTQA MALLSQGRVD VVVNDSLSIY AYLAETNDTA VKIAGATGEK SEQGFAARKN SGLLPDLNTA LEELKADGTL AEISQKYLKT NASGGQDAPQ TQPRSALRLV LDNLWPLARA ALTMTIPLTI ISFVIGLVIA LGVALARLSS NVVLTNLARF YISVIRGTPL LVQLFIVFFA LPEFGVRIDP FPAAVIAFSL NVGGYAAEII RSAIQSIPKG QWEAAETIGL NYAGTLRRII LPQATRVAVP PLSNTLISLV KDTSLASTIL VTELLRQAQI IAAPTFEFFA LYGTAAVYYW VICLVLSFGQ ARFERRLERY VAK
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