Gene Mvan_5574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5574 
Symbol 
ID4647143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5954087 
End bp5954854 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content70% 
IMG OID639809046 
ProductUbiC transcription regulator-associated domain-containing protein 
Protein accessionYP_956345 
Protein GI120406516 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.701747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCACCC AAACCGAGGA TCTGCGGCGC CGGATCGTGT CAGACATCAA CGCCGGCGTG 
CCGGGAACCA AGCTGGGCAG CGAGCGCGAG CTCGCCGAGC GCTACCGGAC CAGCCGGTCC
AGCCTGCGCC AGGTGCTCGC CGCGCTGGAG GAAGCCGGGC TCGTCGACCG GGTGATCGGC
CGCGCCGGCG GGATCTTCAT CAGCCACGCC CAGGTGCAGC GCAGCCTGAC CGACGTCGTC
GGGGTTCCGG CGTTTCTGGC CAGCCAGGGA TACGTCGCGG GCACCCGGGT GCTGTCGACC
AAGATCTGTG CGCCCGACAG CGCCACCCAG CAGGCGCTGA AGATCGGCGC CGACGACTTC
GTCATCGAGA TCCAGCGGCT GCGGCTCGCG GACGGATCCC CGATTTCGCT GGAACTCGCC
CAGTTCCCCG CCGACGCGTT CCCCGGCCTG CTGGAGCAGC AGCTGGGTGG CTCCCTCTAC
GAGATCCTGG AGAGTCAGTA CGGTCTGGTC ACCGCCAGGG CCGACGAACG CATCGAGGCG
GTCAACGCGA CCCCCGAGGA AGCCAACCTG CTCGGCATCA AGGCCAAGTC GGCGCTGCTG
CTGATCACCC GCATCACCTA CGACCAGCAC GACACCCCCT GCGAGTTCTC CCGCGACCTG
TTCCGGGGTG ACCGCACCCG GCTCGCGGTC ACCGCTCAGG GCCGCGGGGT CGGCGTGCAG
CCCTCGGTGG CGGCCGCGTC GGTCGCGCTG CAAAGTCCGC CGATCTGA
 
Protein sequence
MPTQTEDLRR RIVSDINAGV PGTKLGSERE LAERYRTSRS SLRQVLAALE EAGLVDRVIG 
RAGGIFISHA QVQRSLTDVV GVPAFLASQG YVAGTRVLST KICAPDSATQ QALKIGADDF
VIEIQRLRLA DGSPISLELA QFPADAFPGL LEQQLGGSLY EILESQYGLV TARADERIEA
VNATPEEANL LGIKAKSALL LITRITYDQH DTPCEFSRDL FRGDRTRLAV TAQGRGVGVQ
PSVAAASVAL QSPPI