Gene Mvan_5565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5565 
Symbol 
ID4647134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5947032 
End bp5948312 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content66% 
IMG OID639809037 
Productaminotransferase class-III 
Protein accessionYP_956336 
Protein GI120406507 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.292492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACGACT ACGGCACGTT CTCGTTCGAT TCCAAAGCCC AGGTGCTGGA ACGTGCGAAG 
GAGTTCTGGA ACCCGGACAA GACACAGTTC TGGACCGACT CCGGCGTCGA TCTGGTGATC
GACCGCAGGC AGGACTACTT CCTGTGGGAC ATGAGCGGCC GGCGCCTGAT CGACATGCAC
CTCAACGGCG GCACCTACAA CCTGGGCCAC CGCAATCCCG AAGTGATGCA AGCGATCACC
GACGGCATGC AGTACTTCGA CGTCGGCAAC CACCACTTCC CGTCGGTGGC CCGCACCGCT
CTGGCGCAGA AGCTCATCGA GTCCGCGCCC GCCTCGCTGA GCAAGGTGGC GTTCGGGTCC
GGCGGCGGAG AAGCCATCGA CATCGCGCTC AAGAGCGCCC GGCACGCCAC CCAGCGGCGC
AAGATCGTCT CGATCGTCAA GGCCTACCAC GGTCACACCG GGCTGGCCGT CGCCACCGGC
GACGACCGGT TCGCCAAGCT GTTCCTGGCC GACCGGCCCG ACGAGTTCGT CCAGGTTCCG
TTCGGCGACA CCGACGCGAT GGAGCAGGCG CTCCGTGGCC GCGACGTCGC CGCCGTCATC
ATGGAGACGA TCCCGGCCAC GTACGGATTC CCTTTGCCCC CAATCGGTTA CCTGGAGGCG
GTCAAGGATC TGTGCGTGCG TTACGACGCG CTCTACATCG CCGACGAGGT GCAGACCGGG
CTGATGCGCA CCGGTGAGAT GTGGTGCATC AGCAAGCACG GCATCGAGCC CGACATCATG
GTCACCGGCA AGGGACTCTC GGGCGGGATG TACCCGATCA CCGCGGCCCT GCTCAGCGAC
CGGGCGGCGC AGTGGCTGGA CCAGGACGGC TTCGGCCACA TCTCCACGTT CGGCGGTGCC
GAGCTGGGTT GCGTGGCCGC CCTCAAGACC CTGGAGATCA GCAGTCGACC CGAGGTCCGC
TCCTCGGTGC ACTACATCGC CGACATCTTC GCCAAGGGGC TTTCGCGCAT CCAGGCCGAC
TACCCCGGCT GGTTCGTCGG CATCCGGCAG AACGGCGTGG TGATCGGGCT GGAGTTCGAC
CACCCCGAGG GTGCCAAGTT CGTGATGCGT GAGCTGTACC AGAACGGGGT GTGGGCGATC
TTCTCCACAC TGGATCCCCG TGTCCTGCAA TTCAAACCGG GCCTGCTGCT CAACCGTGAC
CTCTGCGAGG ACGTGCTCGA CCGCGTCGAG GTCGCTGTCG GGCGGGCGAA GCTGGCCGCG
ACCGGACGGA GGAAGCCGTG A
 
Protein sequence
MYDYGTFSFD SKAQVLERAK EFWNPDKTQF WTDSGVDLVI DRRQDYFLWD MSGRRLIDMH 
LNGGTYNLGH RNPEVMQAIT DGMQYFDVGN HHFPSVARTA LAQKLIESAP ASLSKVAFGS
GGGEAIDIAL KSARHATQRR KIVSIVKAYH GHTGLAVATG DDRFAKLFLA DRPDEFVQVP
FGDTDAMEQA LRGRDVAAVI METIPATYGF PLPPIGYLEA VKDLCVRYDA LYIADEVQTG
LMRTGEMWCI SKHGIEPDIM VTGKGLSGGM YPITAALLSD RAAQWLDQDG FGHISTFGGA
ELGCVAALKT LEISSRPEVR SSVHYIADIF AKGLSRIQAD YPGWFVGIRQ NGVVIGLEFD
HPEGAKFVMR ELYQNGVWAI FSTLDPRVLQ FKPGLLLNRD LCEDVLDRVE VAVGRAKLAA
TGRRKP