| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5549 |
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| Symbol | ligC |
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| ID | 4645988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 5929804 |
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| End bp | 5930886 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639809022 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_956321 |
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| Protein GI | 120406492 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.480302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTTC CCGTGATGCC CCCGGTCTCG CCGATGCTGT CGAAGTCGGT CGACACCATC
CCCGACGGCG CCTCCTACGA GCCCAAGTGG GACGGATTCC GGTCGATTCT GTTCCGGGAC
GGCAACGAGG TGGAGCTCGG CAGCCGCAAT GAGCGGCCGA TGACGCGGTA TTTTCCCGAG
CTCGTCGAGG CGGCCCGCGC CGAGTTGCCG CCCCGCTGCG TCGTCGACGG AGAGATCGTC
GTCGCCACCG GCGGCGGCCT CGACTTCGAG GCGCTGCAAC TGCGGCTGCA CCCGGCCGCA
TCGCGGGTGC GGATGCTGGC CGAGAAGACG CCGGCGTCGT TCATCGCATT CGACCTGCTC
GCGCTCGACG ACACCGACTA CACCGCGCGG CCGTTCGCCG AGCGGCGGGC GGCGCTGGTC
GGGGCGCTCG CCGGGTGCGG CCCCACGTTC CACGTCACAC CGGCCACCCT GGACGTCGCG
ACGGCGCGAC GGTGGTTCGA CGAGTTCGAA GGCGCCGGGC TCGACGGAGT GATCGCCAAG
CCGCTCGACG GGCACTACCT GCCGGACAAG CGGGTGATGT TCAAGATCAA GCACCAGCGC
ACCGCGGACT GTGTGGTGGC CGGCTACCGC CTGCACAAGT CGGGCCCCGA TGCGGTGGGT
TCACTGCTGC TGGGGCTCTA CGACGACGAC GGTTCGCTGG CGTCGGTGGG CGTCGTCGGC
GCGTTCCCGA TGGCGCGGCG TCGTGAGCTC GTCACCGAAT TGCAGCCGCT GGTGACCACG
TTCGACGGGC ACCCGTGGAA CTGGGCCGCG CAGGTCGACC CGGACACGGT GCGCCGCTAC
GGGGGCGGCT CGCGGTGGAA CGCCGGCAAG GACCTTTCGT TCGTCCCACT GCGTCCCGAA
CGCGTCGTCG AGGTGCGCTA TGACCACATG GAGGGGCAAA GGTTCCGGCA CACAGCGCAA
TTCAACCGCT GGCGACCCGA CCGCGACCCG CTTTCCTGCA CGTTCGACCA ACTCGACCGC
CCACTGACGT TCAGCCTCGA CGACATCGTG CCGGGCCTTG GCGGTACCCG GCCCCGGGGC
TAA
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| Protein sequence | MQLPVMPPVS PMLSKSVDTI PDGASYEPKW DGFRSILFRD GNEVELGSRN ERPMTRYFPE
LVEAARAELP PRCVVDGEIV VATGGGLDFE ALQLRLHPAA SRVRMLAEKT PASFIAFDLL
ALDDTDYTAR PFAERRAALV GALAGCGPTF HVTPATLDVA TARRWFDEFE GAGLDGVIAK
PLDGHYLPDK RVMFKIKHQR TADCVVAGYR LHKSGPDAVG SLLLGLYDDD GSLASVGVVG
AFPMARRREL VTELQPLVTT FDGHPWNWAA QVDPDTVRRY GGGSRWNAGK DLSFVPLRPE
RVVEVRYDHM EGQRFRHTAQ FNRWRPDRDP LSCTFDQLDR PLTFSLDDIV PGLGGTRPRG
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