| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5543 |
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| Symbol | ligC |
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| ID | 4645982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 5923320 |
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| End bp | 5924399 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639809016 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_956315 |
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| Protein GI | 120406486 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCCA TGCCGTTGTC CGCAGACCTT CCGGTCATGC CCCCGCTGGA GCCGATGCTG
GCCAAGGCCC AGACCAAGGT GCCCGACGAG CCCGGCATGT GGTCCTACGA GCCGAAGTGG
GACGGCTTCC GCGCGCTGGT GTTCCGCGAC GGCGGCCCGG GCAGGGACAA CGTGGTGCTG
CTGTCACGCA GCGGCAAGGA TTTGGCCCGG TACTTCCCCG AGGTACTCGA CTCCGTGCGC
GACGAACTCG CGCCCCGCTG TGTCCTCGAC GGCGAGATCG TCGTCCCCCG GGAGATAGCC
GGACGGACAC GGCTGGACTG GGAGTCGCTG AGCCAGCGCA TCCACCCCGC CGAGTCCCGG
GTGCGGATGC TGGCCGAGCA GACCCCGGCG CATTTCATCG GGTTCGACGC GCTGGCCGTC
GGGGACAGCT CGCTGATGAA GGAACCGTTC CGGACCCGCC GCGAAGCGCT CGTCGACGCC
GTCAACGAAA AGCAGTGGTG CCACGTCACG CGCACCACCG AGGATCCCGC TCTGGGCGCG
CAGTGGCTGC AGGAGTTCGA GGGCGCCGGC CTCGACGGCG TGATCGCCAA ACGCCTCGAC
GGGCCCTACC TGCCGGGCAA GCGCGAGATG GTCAAGGTCA AGCACCACCG CGACGCCGAC
TGCGTCGCCA TCGGCTACCG GATCCACAAG AGCGGAGAGG GAATCGGCTC GATCCTGCTC
GGCCTGCACC GTGACGACGG TGAACTCCAG ATGGTCGGCG GTGCCGCCTC GTTCACGGCG
AAGGCGCGGT TGAAGCTGCT GGCCGACCTC GAGCCGCTGC GCATCGGCGA CGACGTGCGC
GACGGTGAAC CCAGCCGGTG GAACTCCGCT GCCGACAAGC GCTGGATCCC GGTGCGGCCC
GAGCGGGTCT GCGAGGTGGC CTACGACCAG ATGGAAGGCA ACTCCGCCAA CGGCCGCCGG
TTCCGGCACG CCGTGAAGTT CCTGCGGTGG CGGCCCGATC GTGATCCGGC CAGCTGCACC
TTCGATCAGC TCGACGTCCC GCTCAACTAT GACCTCAACG ACGTGCTGGA AAGGTCCTGA
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| Protein sequence | MEPMPLSADL PVMPPLEPML AKAQTKVPDE PGMWSYEPKW DGFRALVFRD GGPGRDNVVL
LSRSGKDLAR YFPEVLDSVR DELAPRCVLD GEIVVPREIA GRTRLDWESL SQRIHPAESR
VRMLAEQTPA HFIGFDALAV GDSSLMKEPF RTRREALVDA VNEKQWCHVT RTTEDPALGA
QWLQEFEGAG LDGVIAKRLD GPYLPGKREM VKVKHHRDAD CVAIGYRIHK SGEGIGSILL
GLHRDDGELQ MVGGAASFTA KARLKLLADL EPLRIGDDVR DGEPSRWNSA ADKRWIPVRP
ERVCEVAYDQ MEGNSANGRR FRHAVKFLRW RPDRDPASCT FDQLDVPLNY DLNDVLERS
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