Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_5514 |
Symbol | |
ID | 4648651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 5894954 |
End bp | 5895622 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639808986 |
Product | XRE family transcriptional regulator |
Protein accession | YP_956286 |
Protein GI | 120406457 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.388539 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCCTCC CAGAAGATCC GGCCGATCCC GGCCCGCTGC TCCGCAACAC CTCCGGCACG GCCCGGGACC GCGACCCCGC AGCACCGGTC GAGGAACTCG AGATCGAGGC CGCGATCGGC CGCAACGTGC GACTGCTGCG GCTGCAGCAG GGGCTGACGG TCGCCGAGAC CGCCGCCAGG GTCGGCATCT CGAAGGCCAT GATGAGCAAG ATCGAGAACG CCCAGACCTC CTGCAGCCTG TCCACGCTGG CGCTGCTGGC CAAGGGCTTC GACGTGCCGG TGACCAGCCT GTTCCGCGGG GCCGACGTGG AACGCCCGGC CGCCTTCGTC AAGGCCGGCA CGGGTGCACG CATCGTGCGG GAAGGCACCC GCGAGGGCCA CGAGTACCAG CTGCTGGGGT CGCTGCGGGG CGAGCACAAG CGGCTGGAGT GCCTTGAGGT CACGCTGTCG GGGAAGAGCC AGACGTATCC GCTGTTCCAG CATCCCGGCA CCGAGTTCAT CTACATGCTC GAAGGCGTCA TGGACTACAG CCACAGCCGG ACGGTGTATC GCCTGCATCC CGGCGACTCG CTGCAGATCG ACGGCGAGGG CGCGCACGGC CCCGTCGACC TCGTCGAGGT GCCCATCCGG TTCCTGTCGG TGATCGCCTT CCCCGACTCC CAGGTGTGA
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Protein sequence | MALPEDPADP GPLLRNTSGT ARDRDPAAPV EELEIEAAIG RNVRLLRLQQ GLTVAETAAR VGISKAMMSK IENAQTSCSL STLALLAKGF DVPVTSLFRG ADVERPAAFV KAGTGARIVR EGTREGHEYQ LLGSLRGEHK RLECLEVTLS GKSQTYPLFQ HPGTEFIYML EGVMDYSHSR TVYRLHPGDS LQIDGEGAHG PVDLVEVPIR FLSVIAFPDS QV
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