Gene Mvan_5514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5514 
Symbol 
ID4648651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5894954 
End bp5895622 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content69% 
IMG OID639808986 
ProductXRE family transcriptional regulator 
Protein accessionYP_956286 
Protein GI120406457 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.388539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCTCC CAGAAGATCC GGCCGATCCC GGCCCGCTGC TCCGCAACAC CTCCGGCACG 
GCCCGGGACC GCGACCCCGC AGCACCGGTC GAGGAACTCG AGATCGAGGC CGCGATCGGC
CGCAACGTGC GACTGCTGCG GCTGCAGCAG GGGCTGACGG TCGCCGAGAC CGCCGCCAGG
GTCGGCATCT CGAAGGCCAT GATGAGCAAG ATCGAGAACG CCCAGACCTC CTGCAGCCTG
TCCACGCTGG CGCTGCTGGC CAAGGGCTTC GACGTGCCGG TGACCAGCCT GTTCCGCGGG
GCCGACGTGG AACGCCCGGC CGCCTTCGTC AAGGCCGGCA CGGGTGCACG CATCGTGCGG
GAAGGCACCC GCGAGGGCCA CGAGTACCAG CTGCTGGGGT CGCTGCGGGG CGAGCACAAG
CGGCTGGAGT GCCTTGAGGT CACGCTGTCG GGGAAGAGCC AGACGTATCC GCTGTTCCAG
CATCCCGGCA CCGAGTTCAT CTACATGCTC GAAGGCGTCA TGGACTACAG CCACAGCCGG
ACGGTGTATC GCCTGCATCC CGGCGACTCG CTGCAGATCG ACGGCGAGGG CGCGCACGGC
CCCGTCGACC TCGTCGAGGT GCCCATCCGG TTCCTGTCGG TGATCGCCTT CCCCGACTCC
CAGGTGTGA
 
Protein sequence
MALPEDPADP GPLLRNTSGT ARDRDPAAPV EELEIEAAIG RNVRLLRLQQ GLTVAETAAR 
VGISKAMMSK IENAQTSCSL STLALLAKGF DVPVTSLFRG ADVERPAAFV KAGTGARIVR
EGTREGHEYQ LLGSLRGEHK RLECLEVTLS GKSQTYPLFQ HPGTEFIYML EGVMDYSHSR
TVYRLHPGDS LQIDGEGAHG PVDLVEVPIR FLSVIAFPDS QV