Gene Mvan_5513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5513 
Symbol 
ID4648650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5893748 
End bp5894944 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content70% 
IMG OID639808985 
ProductFAD dependent oxidoreductase 
Protein accessionYP_956285 
Protein GI120406456 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.225549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGA CAGCCGATGT CGTCATCGTC GGCGGCGGCC TGGAGGGCGC CGCGGCCGCA 
TGGGCGCTGA GCCGTCGCGG GGTGACCGAC GTCGTGGTGG CCGAACGCAA CACCGTCGGC
TCCGGGATGA CCGGTAAGTC CAGCGGCATC GTCCGCTGCC ACTACGGGGT GAGCTCGCTG
GCCGCGATGG CCGCCGACGG GCTCGAGGTC TTCGAGAACG GTGAGGACAT CTTCGGTACC
GACATCGGGT TCCGCCAGAC CGGCTACGTC GTCGGCGTCG GCGAACAGAA CGTCGAGTCG
CTGCGCAAAA GCCTTGCCGC GCAACGCGCC GTCGGGGTGG ACACCGAGGA GATCGACAAG
GACGAGGTCG CGAAGCTGTG GCCGTTCGCC GACCTGACAC CGTTCGCGGC GTTCGGCTGG
GAAGCCCGCG GCGGGTACGG CGACGCCTAC CAGACCGCGC AGGCGTTCTC CACGGCGGCG
CGCGCCGCCG GCGCACGGGT TCGGCAGGGC ACCGCGGTGA CGGACCTGCT CGTCGACGGC
GACCGGGTGA CCGGAGTGCG GACCGCCGAC GGCAGCGAGA TCTTTGCGGG CACCGTGGTC
GTCGCCACGG GCGTGTGGAC CCGTCCGTTC CTGGCGCGCT ACGGCATCGA CGTGCCGATC
CGGGTGATCC GCGAACAGAT CGTGCTGATC GACCCGGGTG TAGAGGTGGG GAAGGTGCCC
GTCTTCTCCG ACCTGGTGTC GCTGCAGTAC GTGCGGCCCG AAGTCGGCGG CGAGATCCTG
TTCGGCAACA GCGACCTGCC CGGCTATGAC GCAATCGATC CGGCCGACCC CGACGACTAT
CTGAACCGGG CCACCGACGG CTTCGTCGAC CTCACCGTCG ACAAGGTCGG CACCCGGTTC
CCCGGCTTCC CCGACGCCGC GATCTCCGGC AGCTACGCCG GCTGCTACGA CGTCACCCCC
GACTGGAACC CGATCATCTC GGTCGCCCCC CTGGACGGGC TCGTCATCGC CGCCGGGTTC
AGCGGGCACG GTTTCAAGAT CGCACCCGCG GTGGGCCGAC TGGTCGCCGA CATCGTCGTC
GACGGCCACA GCAGCGACTC CCGCATCCCC GCATCGGACT TCCGGTTCTC CCGCTTCGCC
GAGGACGACC CGCTCAAGAC GCCCTACCCC TACGTCGGCG CGGGGCAGAT GCGCTAG
 
Protein sequence
MTETADVVIV GGGLEGAAAA WALSRRGVTD VVVAERNTVG SGMTGKSSGI VRCHYGVSSL 
AAMAADGLEV FENGEDIFGT DIGFRQTGYV VGVGEQNVES LRKSLAAQRA VGVDTEEIDK
DEVAKLWPFA DLTPFAAFGW EARGGYGDAY QTAQAFSTAA RAAGARVRQG TAVTDLLVDG
DRVTGVRTAD GSEIFAGTVV VATGVWTRPF LARYGIDVPI RVIREQIVLI DPGVEVGKVP
VFSDLVSLQY VRPEVGGEIL FGNSDLPGYD AIDPADPDDY LNRATDGFVD LTVDKVGTRF
PGFPDAAISG SYAGCYDVTP DWNPIISVAP LDGLVIAAGF SGHGFKIAPA VGRLVADIVV
DGHSSDSRIP ASDFRFSRFA EDDPLKTPYP YVGAGQMR