Gene Mvan_5504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5504 
Symbol 
ID4648592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5885147 
End bp5886412 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content68% 
IMG OID639808976 
Productaspartate kinase 
Protein accessionYP_956276 
Protein GI120406447 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0983688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCTCG TCGTACAGAA ATACGGCGGA TCCTCGGTGT CGGACGCCGA GCGGATCCGC 
CGTGTGGCCG AGCGCATCGT CGAGACGAAG AAGGCCGGCA ACGACGTCGT CGTGGTCGTC
TCGGCGATGG GCGACACCAC CGACGAACTG CTCGACCTGG CCAAGCAGGT GTCCCCGGCG
CCGCCGGCGC GGGAGCTCGA CATGCTGCTG ACCGCGGGTG AACGCATCTC CAACGCGCTG
GTCGCCATGG CCATCGAGTC GCTGGGCGCC GAGGCCCGCA GCTTCACCGG CTCGCAGGCC
GGCGTCGTCA CCACGGGCAC CCACGGCAAC GCCAAGATCA TCGACGTCAC CCCCACCAGG
CTGCGGGCCG CGCTCGACGA GGGCCAGATC GTGCTGGTGG CCGGCTTCCA GGGCGTCAGC
CAGGACACCA AGGACGTCAC CACGTTGGGC CGCGGCGGCT CGGACACCAC CGCCGTCGCG
GTGGCCGCCG CGCTGAAGGC CGACGTGTGC GAGATCTACA CCGACGTCGA CGGCATCTTC
ACCGCTGACC CGCGCATCGT TCCGAACGCC CGGCGGCTGG ACACGGTCTC CTTCGAGGAG
ATGCTGGAGA TGGCCGCCGC CGGAGCCAAG GTGCTGATGC TGCGCTGCGT CGAGTACGCG
CGCCGTTTCG ACCTGCCCAT CCACGTCCGG TCGTCGTACT CCGACAATCC GGGCACCATC
GTCAAAGGAT CGATCGAGGA CATCCCCATG GAAGACGCCA TCCTCACCGG AGTAGCCCAC
GACCGCGGCG AAGCGAAGGT GACCGTCGTC GGGTTGCCCG ACGTTCCCGG CTACGCCGCC
CAGGTGTTCC GCGCGGTCGC CGACGCCGAC GTCAACATCG ACATGGTGCT GCAGAACATC
TCGAAGGTCG AGGACGGCAA GACCGACATC ACCTTCACCT GCTCGCGCGA AAGCGGGCCG
GGCGCGGTGG AGAAGCTGAC CGCGTTGCAG GACGAAATCG GTTTCACCCG TGTGCTTTAC
GACGACCACA TCGGCAAGGT GTCGCTGATC GGCGCCGGGA TGCGGTCGCA CCCCGGTGTG
ACGGCGACGT TCTGTGAGGC GCTGGCCGAC GCGGGCATCA ACATCGATCT CATCTCCACC
TCCGAGATCC GGATCTCGGT CCTGATCAAG GACACCGAGC TCGACAGGGC CGTCGAGGCG
CTGCACGACG CATTCGGGCT CGGCGGCGAC GAAGAGGCCG TGGTCTACGC GGGGACAGGG
CGGTAG
 
Protein sequence
MALVVQKYGG SSVSDAERIR RVAERIVETK KAGNDVVVVV SAMGDTTDEL LDLAKQVSPA 
PPARELDMLL TAGERISNAL VAMAIESLGA EARSFTGSQA GVVTTGTHGN AKIIDVTPTR
LRAALDEGQI VLVAGFQGVS QDTKDVTTLG RGGSDTTAVA VAAALKADVC EIYTDVDGIF
TADPRIVPNA RRLDTVSFEE MLEMAAAGAK VLMLRCVEYA RRFDLPIHVR SSYSDNPGTI
VKGSIEDIPM EDAILTGVAH DRGEAKVTVV GLPDVPGYAA QVFRAVADAD VNIDMVLQNI
SKVEDGKTDI TFTCSRESGP GAVEKLTALQ DEIGFTRVLY DDHIGKVSLI GAGMRSHPGV
TATFCEALAD AGINIDLIST SEIRISVLIK DTELDRAVEA LHDAFGLGGD EEAVVYAGTG
R