Gene Mvan_5492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5492 
Symbol 
ID4648580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5873827 
End bp5874078 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content69% 
IMG OID639808967 
Product30S ribosomal protein S18 
Protein accessionYP_956267 
Protein GI120406438 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0238] Ribosomal protein S18 
TIGRFAM ID[TIGR00165] ribosomal protein S18 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.115937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0428851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCGC GGCGGCGCGA GGCCGCACCG GCCAAGAAGC GCCGAAACCT GTTGAAGAGC 
CTGGGGATCG AGCGCGTCGA CTACAAGGAC ACCTCGACAC TGCGGCAGTT CATCTCCGAG
CGCGGCAAGA TCCGCTCGCG GTCGGTGACC GGCCTGACCG TACAGCAGCA GCGCCAGGTC
ACCACGGCCG TCAAGACCGC CCGCGAGATG GCGCTGCTGC CGTACCCGGG TCAGAATCCG
ACCGGCCGCT AG
 
Protein sequence
MTARRREAAP AKKRRNLLKS LGIERVDYKD TSTLRQFISE RGKIRSRSVT GLTVQQQRQV 
TTAVKTAREM ALLPYPGQNP TGR