Gene Mvan_5485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5485 
Symbol 
ID4648573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5868467 
End bp5869813 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content71% 
IMG OID639808960 
Producthypothetical protein 
Protein accessionYP_956260 
Protein GI120406431 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03440] conserved hypothetical protein TIGR03440 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.152012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0898392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACAC GCGAGGCGCT TGCCTGCGAG CTGACCGAGG CCAGGGACCG CACGCTGCGG 
CTCGTCGCGT TCGACGACGC CGAACTGCGG CGCCAGTACG ACCCGTTGAT GAGCCCGCTG
GTCTGGGACC TCGCCCACAT CGGCCAGCAG GAAGAGCTGT GGCTGCTGCG GGGCGGCAAC
CCCGACCGGC CCGGCCTGCT GCCGCCGCAG GTGGACCAGC TCTACGACGC GTTCGTGCAC
TCCCGTGCCA GCCGCGCCGA CCTGCCGCTG TTGCCGCCGA CCGACGCCCG CAACTACTGC
GCGACCGTGC GGGGCAAGGT GCTCGACGCG CTGGACGCGT TGCCCGACGG GCACCCCGAC
GCCTTCACGT TCGGGCTCGT CGTCAGCCAC GAGAACCAGC ACGACGAGAC GATGCTGCAG
GCGCTGAGCC TGCGGTCCGG TGCCCCACTG CTCGACCGTG GCACATCGCT GCCGCCGGGC
CGCCCTCAGA CCGCAGGCAC CTCGGTGCGG GTTCCCGCCG GCGAGTTCGT GCTGGGTGTC
GACGCGGTGA CCGAGCCGTA CTCGCTGGAC AACGAACGCC CCGCCCACGT CGTCGACGTG
CCCGCGTTCC GGATCGGCCG CGTGCCGGTG ACCAACGCGG AGTGGCGCCA GTTCGTCGAC
GACGGCGGCT ACCACCGACG CCAGTGGTGG TCGGATGCGG GCTGGGCACA CCGCAGGCAG
GCGGGCCTGA CCGCGCCGCT GTACTGGAAC GGGGACGGCA GCCGCACCCG CTTCGGGTAC
GTCGAGGAGA TTCCCGGCGA GGAACCCGTT CAGCACGTCA CCTACTACGA AGCCGAGGCG
TATGCGGCGT GGGCGGGGGC GCGCCTGCCC ACCGAGGTGG AGTGGGAGAA GGCCTGCGCC
TGGGACCCCG AAACCAACTC CCGGCGCCGA TATCCCTGGG GCGCAACCGA ACCCACCGCC
GAGGTGGCCA ACCTCGGTGG CCGGGCCCTG CGTCCGGCGC CCGTCGGGGC GTACCCGCAG
AGTGCGTCGG CCTACGGGGC CGAGCAGATG CTCGGCGACG TGTGGGAGTG GACGAGCTCA
CCGTTGCGGC CGTGGCCCGG CTTCACACCG ATGGTCTACG AGCGGTACTC ACAGCCGTTC
TTCGACGGCA CCGGCACGGG CGAGTACCGG GTCCTGCGCG GCGGATCCTG GGCCGTCGCG
CCCAACATCC TGCGCCCCAG CTTCCGCAAC TGGGACCATC CGATCCGCAG GCAGATCTTC
TCCGGCGTGC GCCTTGCTTG GGACGATGTG GGGGCACCTC CCGCTTGCGG GGGACCGCTT
ACGCGAAGAG TAGATGGATA TGTGTAG
 
Protein sequence
MTTREALACE LTEARDRTLR LVAFDDAELR RQYDPLMSPL VWDLAHIGQQ EELWLLRGGN 
PDRPGLLPPQ VDQLYDAFVH SRASRADLPL LPPTDARNYC ATVRGKVLDA LDALPDGHPD
AFTFGLVVSH ENQHDETMLQ ALSLRSGAPL LDRGTSLPPG RPQTAGTSVR VPAGEFVLGV
DAVTEPYSLD NERPAHVVDV PAFRIGRVPV TNAEWRQFVD DGGYHRRQWW SDAGWAHRRQ
AGLTAPLYWN GDGSRTRFGY VEEIPGEEPV QHVTYYEAEA YAAWAGARLP TEVEWEKACA
WDPETNSRRR YPWGATEPTA EVANLGGRAL RPAPVGAYPQ SASAYGAEQM LGDVWEWTSS
PLRPWPGFTP MVYERYSQPF FDGTGTGEYR VLRGGSWAVA PNILRPSFRN WDHPIRRQIF
SGVRLAWDDV GAPPACGGPL TRRVDGYV