Gene Mvan_5484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5484 
Symbol 
ID4648572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5867785 
End bp5868480 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content71% 
IMG OID639808959 
Producthypothetical protein 
Protein accessionYP_956259 
Protein GI120406430 
COG category[R] General function prediction only 
COG ID[COG0121] Predicted glutamine amidotransferase 
TIGRFAM ID[TIGR03442] conserved hypothetical protein TIGR03442 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.283261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0812998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATGT GTAGGCACCT GGGCTGGCTC GGCGACCCCG TCTCGGTCGC CTCGCTGATA 
CTGGAACCGC CGTCGGGGCT GCTGGTGCAG TCGTATTCGC CGCGCCGCCA GAAGCATGGA
TTGATGAACG CCGACGGGTG GGGCGTCGGC TTCTTCGACG GGGCGGTGGC CCGGCGCTGG
CGCAGCGCGG CCCCGCTGTG GGGTGACGCG TCATTCGCCT CCGTCGCGCC GGCGCTGCGC
AGCGGGTGTG TGGTGGCCGC CGTGCGGTCG GCCAGCGTCG GCATGCCCAT CGAGGCGTCG
GCCTCGGCGC CGTTCACCGA CGGCACCTGG CTGCTGTCCC ACAACGGGCT CGTCGACCGC
GCAGTGCTGC CTTCGTCCCC GCGCGCCGAG TCCACCAACG ACAGCGCGCT GCTGGCGGCG
CTGATCTTCG ACCGCGGCAT CGACGAGCTC GGCGCCACCA TCGCCGGCGT GGCTGCCGAG
GACCCGAACG CCCGGCTGAA CATCCTGGCC GGCAACGGAA CTCGTCTTCT GGCGACCACC
TGGGGCGACA CGCTGTCGGT GTTGCGCCGT GACGACGGCG TGGTGGTGGC AAGCGAACCC
TACGACGACG ACCCCGCCTG GCAGGAAGTC CCGGACCGCC ACCTCGTCGA GGTCGACGGG
GCGCACGTGC ACCTGAGACC GCTGAAAGGA TCGTGA
 
Protein sequence
MDMCRHLGWL GDPVSVASLI LEPPSGLLVQ SYSPRRQKHG LMNADGWGVG FFDGAVARRW 
RSAAPLWGDA SFASVAPALR SGCVVAAVRS ASVGMPIEAS ASAPFTDGTW LLSHNGLVDR
AVLPSSPRAE STNDSALLAA LIFDRGIDEL GATIAGVAAE DPNARLNILA GNGTRLLATT
WGDTLSVLRR DDGVVVASEP YDDDPAWQEV PDRHLVEVDG AHVHLRPLKG S