Gene Mvan_5482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5482 
Symbol 
ID4648570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5865744 
End bp5866823 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content72% 
IMG OID639808957 
Productaminotransferase, class V 
Protein accessionYP_956257 
Protein GI120406428 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0362995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.199376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCG CCGAGCAGTG GCGCGCGGCG CGACCACCCG TCGCCGGGGT CCACGTCGAC 
AGCGCGGCAT GTTCGCGTCA GAGCTTCGCC GTCATCGAGG CCGCGGCCCA GCACGCCCGC
CACGAGGCGG AGGTCGGCGG CTACGTCGCA GCCGAGGCTG CCGCGCCCGC ACTGGATGCT
GGCCGCACCG CCGTCCGGGC TCTCACCGGA ATGTCCGATG CGGTAGTCCA TTTCACCACC
GGATCGAATC ACGCCCTGGA CATCCTGCTC GGGGACTGGA CGGGTGCGCG CACGCTGGCC
TGCCTTCCCG GCGAGTTCGG CCCCAACCTG GCGATCATGG CGCGCCACGG GTTCAGCATC
AAGGTCCTCC CGGTCGACGA GTTCGGTCGG CTGGACGTCA ATGCGGTCGG TGCCGCGCTG
TCGTCGCATC AGCCCGCCCT CGTGCACTTC ACCGTGCTGG GCAGCCACAG CGGGATCGTT
CAGCCGGTGC GCGACATGGC GTCGGCGTGC CGGGGGCACG GCATACCGCT GATCGTCGAC
GCTGCGCAGG GATTCGCGCA CCTCGACGTC GCCGGAATCG GCGCCGACGC GCTGTACTCG
TCGTCGCGCA AATGGACGGC AGGCCCCCGC GGGGTGGGGG TGCTCGCCAG CAGGCCCGGC
CTGCTGGCCG ACGACACCCG CATCCGGCTC AACCACGCCG AGACGAATGT CGGCCTGCAG
GTGGGCTTCT CGGTCGCGGT GGGGGAATAC GTGGCCGCCG GTCCCGACGC GGTGCAGTCC
CGGCTGCGCG AAGTCGGCGC GGCCACCCGC ACCGCGCTCG CCGACGTGCC GGGCTGGCGG
GTGGTCGAAC ACGTCACCGA ACCCAGCGCC ATCACCACGC TGCAGTCCAC CGACGGGATC
GACCCGCTGG ACGTGCGCAC CCGCCTGATC GCCGAACACC AGATCGTGAC CACCTACCTC
GGTCTGGAAC GCGCGCCGCG GGAGATGAGC CACCCGGCGC TGCGGGTCTC CCCGCACGTC
GACGTCACCG ACGCCGACCT CGCGGCCCTC GCCGACGCGC TGGCCACCGT CACACGCTGA
 
Protein sequence
MTLAEQWRAA RPPVAGVHVD SAACSRQSFA VIEAAAQHAR HEAEVGGYVA AEAAAPALDA 
GRTAVRALTG MSDAVVHFTT GSNHALDILL GDWTGARTLA CLPGEFGPNL AIMARHGFSI
KVLPVDEFGR LDVNAVGAAL SSHQPALVHF TVLGSHSGIV QPVRDMASAC RGHGIPLIVD
AAQGFAHLDV AGIGADALYS SSRKWTAGPR GVGVLASRPG LLADDTRIRL NHAETNVGLQ
VGFSVAVGEY VAAGPDAVQS RLREVGAATR TALADVPGWR VVEHVTEPSA ITTLQSTDGI
DPLDVRTRLI AEHQIVTTYL GLERAPREMS HPALRVSPHV DVTDADLAAL ADALATVTR