Gene Mvan_5452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5452 
Symbol 
ID4644565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5833497 
End bp5834651 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content69% 
IMG OID639808928 
Productputative transmembrane protein 
Protein accessionYP_956228 
Protein GI120406399 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.982552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.461593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTACA ACGCCGGCGG ATACGGTCCG GCGGGGCCAC CACCCCCCGG ATATCCCGCA 
CCTGGGTATC CGGGCTACCC GCCCGCCGGC TACGGCGCAC CGCCGCAGTA CTGGCAGCCC
CCCGGCTACG CCCCTGGCTA TGGTGCGCCC GGATATCCTC CGCAGTTCGG TCTGCCGCCG
GTCATCAAAC CCGGCGTCGT CCCGCTGCGC CCGTTGACGC TGTCCGACAT CTTCAACGGC
GCGGTGGCCT ACATCCGCAC CAATCCCAAA GCGACGCTGG GCCTTACAGC GATCGTGGTG
ATCGCATCGC AGATCGTCGC GCTGCTGCTG TCGCTGTGGC CGTTCGCGTT CACCGGCCAG
GTCGCCTCAA CCCTGGACGG TGACGAGGCC TCCACCGAGG TGCTGGTCAG CTGGATGGCG
TCCAGCCTTG CCACCGCGAT CACGACCGGG CTGTCGACGA CGCTGCTCAG CGGCCTGCTG
ACCGTCGTGA TCGGGCGTTC GGTGTTCGGC GCGGACATCA CCATCGGCGA GGCGTGGCGG
CGGCTGCGCC CGCGACTGTG GGCGCTGATC GGGTTCACGG TGCTCAAGAC GCTCGCTCTC
ATCGTGTGGT TCGGGGTCGT GCTGCTGATC GTCGTGCTGG CGGTGGCCGT GATCGACGGC
CCCGCCGCGT TCCTGATCGC CGCTCCGCTG GTGCTCGCGT CGATCCTGGC GGCGGTCTGG
GTGTCGGTCA TGCTGACGTT CGCGCCGGCA GTCATCGTGC TGGAGCGGCG CGACATCGTG
ACCTCGGTGA AGCGGTCGTT CGCGCTGATC AAGAGCGATT TCTGGCGGGT TTTCGGGATC
TGGCTGCTGG CGGCGATCGT GGCCCAGTTC ATTGCGGGGG CGGTGTCGAT CCCGTTCAGC
ATCGGCGGGC AGGCGGTGCT CACCGCGTCG GCGACCACGA CCGCGGCGAT GATCTCGATG
GTGCTGTTCT CGGTCGGCGG GGCCGTCGGC CAGATCATCA CCGGCCCGTT CAGTGCCGGC
GTGACGGTCC TGCAGTACAC CGACCGTCGG ATCCGGGCCG AGGCGTTCGA CCTGGTGCTG
CAGACCGGCG CCGCGGCCGG CCCGCAGGCG CCTGCGGACT CCACCGACGA TCTCTGGCTC
ACCGGCCCGC GTTGA
 
Protein sequence
MTYNAGGYGP AGPPPPGYPA PGYPGYPPAG YGAPPQYWQP PGYAPGYGAP GYPPQFGLPP 
VIKPGVVPLR PLTLSDIFNG AVAYIRTNPK ATLGLTAIVV IASQIVALLL SLWPFAFTGQ
VASTLDGDEA STEVLVSWMA SSLATAITTG LSTTLLSGLL TVVIGRSVFG ADITIGEAWR
RLRPRLWALI GFTVLKTLAL IVWFGVVLLI VVLAVAVIDG PAAFLIAAPL VLASILAAVW
VSVMLTFAPA VIVLERRDIV TSVKRSFALI KSDFWRVFGI WLLAAIVAQF IAGAVSIPFS
IGGQAVLTAS ATTTAAMISM VLFSVGGAVG QIITGPFSAG VTVLQYTDRR IRAEAFDLVL
QTGAAAGPQA PADSTDDLWL TGPR