| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5421 |
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| Symbol | |
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| ID | 4646614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 5800507 |
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| End bp | 5801703 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639808896 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_956197 |
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| Protein GI | 120406368 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.4117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCGC CGCTGATCGA TCGGGTTCGG GAACGACTCG CGATGCAGTC CTCACCGCTG
CGACCGAGCG TGGTGGCCGC CGCCATCCGG GCCGAGTCCG GCGGCGTGCT GGGAGACGCA
GAAGTGCTGA CCAACCTGCG CGAACTACAG ACCGAGTTGA TCGGAGCGGG CATTCTCGAT
CCGCTGTTGT CGGGCCCCGG CGTCACGGAT GTGCTTGTCA CGGCACCCGA CGCGGTCTGG
GTCGACGACG GCAACGGCTT GCGGCGGACC TCCGTGCGCT TCGCTGACGA CGCCGCCGTC
CGGCGCCTCG CGCAGCGCTT GGCGTTGACC GCGGGACGCC GCCTCGACGA GGCTCAACCG
TGGGTCGACG GGAATCTCAG CGGCTTCGGC GCCGGTCAGC CCGGCGGACC GCTCAGCGTC
CGACTGCACG CCGTGCTGCC GCCGGTCGCC GCAGGCGGGA CATGCCTGTC GCTGCGGGTG
CTGCGGCCGG CCAACCAGGA CCTCGACGCA CTGATCGGCG CGGGCGCGAT CGAGCCGGAC
GCCGCGGGCA TCCTGCGCGA CGTGATCTCC GCCCGGCTGG CCTTCGTCGT GTCCGGTGGG
ACGGGCGCCG GCAAGACCAC CTTGCTGGCG GCGTTGCTCG CCGCGGTGCC CGAGGACGAG
CGCATCGTCT GTGTGGAGGA CGCCGCCGAA CTCGCGCCGG ATCATCCGCA TCTGGTCAAG
CTCGTCGCAC GCTGCGCGAA CGTCGAAGGC GCGGGCGAAG TGACCGTGCG TGACCTCGTC
CGGCAGGCGC TGCGGATGCG ACCCGACCGC ATCGTGATCG GTGAGGTGCG CGGCGCCGAG
GTGGTGGACC TGCTCACCGC GCTGAACACC GGTCATGACG GTGGCGCGGG GACCGTGCAT
GCGAACAACC CCGCCGAGGT GCCGGCACGT TTCGAGGCGC TCGCCGCGCT CGGCGGCCTC
GACCGTGCAG CGCTGCACAG CCAACTCGCG GCAGCGATCT TATCTGTAAC GGGTTGTGGG
GTGTGTAGGA CTGTCACCCA CGTGGGTTTT AGATGGGGTT TTCTCGTAGG GGACACTGTT
ATCTGTAACG GTGTCACCGA CGTTGGCTCG CGGTGGGTGT TGCTGTGTTG CGGAGGCGGT
GCAGTTCGCC GTGTGCGGTG GCGAGGGCTT GTTCGAGGGT TTTGTTCTCG GCTTTGA
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| Protein sequence | MSAPLIDRVR ERLAMQSSPL RPSVVAAAIR AESGGVLGDA EVLTNLRELQ TELIGAGILD
PLLSGPGVTD VLVTAPDAVW VDDGNGLRRT SVRFADDAAV RRLAQRLALT AGRRLDEAQP
WVDGNLSGFG AGQPGGPLSV RLHAVLPPVA AGGTCLSLRV LRPANQDLDA LIGAGAIEPD
AAGILRDVIS ARLAFVVSGG TGAGKTTLLA ALLAAVPEDE RIVCVEDAAE LAPDHPHLVK
LVARCANVEG AGEVTVRDLV RQALRMRPDR IVIGEVRGAE VVDLLTALNT GHDGGAGTVH
ANNPAEVPAR FEALAALGGL DRAALHSQLA AAILSVTGCG VCRTVTHVGF RWGFLVGDTV
ICNGVTDVGS RWVLLCCGGG AVRRVRWRGL VRGFCSRL
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