Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_5347 |
Symbol | |
ID | 4647781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 5723431 |
End bp | 5724333 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639808822 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_956124 |
Protein GI | 120406295 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGCCT CAACGGACGA GCACGGTGAG CGGTTCACCG TCCTGCGGCC GCTGCTGTTC ACCATCGCCT ACGAAATACT GGGCAGCGCA ACTGAATCCG AAGACGTGCT GCAGGACAGC TATCTGCGGT GGGCCGACGT AGACCTCGCA ACCGTGCGCG ATACGAAGTC ATACCTCGCC CAGCTGGTGA CCCGCGAGGC GCTCAACGCG CTGCGTGCCC GGTCGCGTCG GCGTGAGGAG TATGTCGGTC CCTGGCTGCC GGAGCCGCTG CTGCTCGACG AGCGTGACGC GTCCGCCGAC ATCGTGCTGG CCGAGTCGGT CTCGATGGCG ATGTTGGTTC TGCTCGAGAC CCTCACGCCC GACGAGAGGG CGGTTTTCGT GCTGCGTGAG GTGTTCGGCT TCGACTACGA CGAGATCGCC GGGGCGGTCG GCCGGTCGAC ACAGGCGGTC CGCCAGATCG CGCACCGCGC AAAGGAACAC GTGCATGCGC GACGCAAGCG GTTCGGTCCC GTGGACTCGC GCAGGACCAC ACAGATCACC GAGCAGTTCC TGACCGCTGC GGCCACCGGT GACATGGAGG AACTGGTGTC GATGCTGGCA CCCGGCGCGA CCTGGACCGC AGACCACGGC GGAAAGGCCA CCGCCGTCCG CAGGCCCGTG GTCGGGGCGC GCAAGGTGGC GGCAATCATG GCCCGGGTTT TCCAGGCGGT CAGGAAGACG CCACAGATGC GGCTCGAGAC AGCGGTGTAC AACAGCGCGC CCGCGGTGGT CGTCTACACC GAAGACCACC TGGAGGGAGT CCTGCTGTTC GAGGTGGTCG ACGACAAGAT CACCAACCTG TACGCGATGC GGAATCCGGA CAAACTGACG GGCATCACCA TCCCACGTAA GATCACCCGT TAG
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Protein sequence | MTASTDEHGE RFTVLRPLLF TIAYEILGSA TESEDVLQDS YLRWADVDLA TVRDTKSYLA QLVTREALNA LRARSRRREE YVGPWLPEPL LLDERDASAD IVLAESVSMA MLVLLETLTP DERAVFVLRE VFGFDYDEIA GAVGRSTQAV RQIAHRAKEH VHARRKRFGP VDSRRTTQIT EQFLTAAATG DMEELVSMLA PGATWTADHG GKATAVRRPV VGARKVAAIM ARVFQAVRKT PQMRLETAVY NSAPAVVVYT EDHLEGVLLF EVVDDKITNL YAMRNPDKLT GITIPRKITR
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