Gene Mvan_5316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5316 
Symbol 
ID4644441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5693911 
End bp5694975 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content66% 
IMG OID639808791 
Productpermease 
Protein accessionYP_956093 
Protein GI120406264 
COG category[R] General function prediction only 
COG ID[COG0701] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.465068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.121906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCG CTTCGCGTGA CGCTCCGGCC GCAGGTCCGG GTGGCCCGTC GGAGCGCACC 
AGGACCCTGG GAATTCTGCT GCTCGCCGCA TTCGGCTGGG TCGGTGCCTA CGTCCTGAAC
GAGCACCTCT GGGATGCGGC AGTCGGTTGG CTGGGGCTCG ATCTTCACAC TCGCGCCGTC
GGCGCCGTGC ACTTCTTCCT GTACGACACG GTGAAGATCT TTCTGCTGCT CACCGGACTG
ATGTTCGTCG TCGGCATGCT GCGCGCGAGC CTCGATCTGG ACAGGGCCAG GGACTATCTG
CGAGGGCGCG GGCTGTTCGT CGGGCTGGTG CTCGCAGTGT TCCTCGGCGT CGTGACGCCG
TTCTGCTCCT GCAGTTCGAT TCCGCTGTTC ATCGGGTTCG TCGCGGCGGG CATCCCGCTG
TCGATCACCC TGACCTTCCT CATCGCGTCG CCGCTGGTCA GCGAGATCGC CGCGATCATG
ATCGGTGACC AGTTCGGCTG GCACATCGCA GCCGTCTACG TGGTGGCCGG CAGTGTGCTG
TCCCTGGTGA TCGGCTGGAT CTTCTCGCGC TTCGACCTCA GCCGATGGGT CGAGCCCATG
GTGTTCACCA CGAAGGTGGC GGCGCTGCGC GCCGACGGGC GCGTGCCCTC GCTGGCCGAG
CGGGTCGATG CCGCGGTCGA CGAGACCAAG GACATCTTCC GGAGCGTGTG GCTGTGGGTA
CTGCTCGGAG TCGGCATCGG AGCCGTCATC CACGGGTGGG TTCCGGCCGA CTTCTTCGTG
CGTTTCGCCG GACCGGGCAA CCCGTTCGCG GTCGTCGTTG CGACGCTGGC CGGAGTGCCC
CTGTATGTCA ACGGCGCCGG CGTCGTGCCG ATCGCAGAGG CGCTGTGGGC CAAAGGAATG
TCGCTGGGCA CGGTGATGGC GTTCACGATG AGCACGATCG CCTTGTCGGT GCCGCAGGCG
GTCATGCTGC GCCGGGTGAT GAAGCCGCCC CTGCTGGCAT TGTTCTTCGG CACGGTGGCC
TTCGGAATCA TGATCATCGG ATTCCTGTTC AACCTCGTCG GCTGA
 
Protein sequence
MSTASRDAPA AGPGGPSERT RTLGILLLAA FGWVGAYVLN EHLWDAAVGW LGLDLHTRAV 
GAVHFFLYDT VKIFLLLTGL MFVVGMLRAS LDLDRARDYL RGRGLFVGLV LAVFLGVVTP
FCSCSSIPLF IGFVAAGIPL SITLTFLIAS PLVSEIAAIM IGDQFGWHIA AVYVVAGSVL
SLVIGWIFSR FDLSRWVEPM VFTTKVAALR ADGRVPSLAE RVDAAVDETK DIFRSVWLWV
LLGVGIGAVI HGWVPADFFV RFAGPGNPFA VVVATLAGVP LYVNGAGVVP IAEALWAKGM
SLGTVMAFTM STIALSVPQA VMLRRVMKPP LLALFFGTVA FGIMIIGFLF NLVG