| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5301 |
|---|
| Symbol | |
|---|
| ID | 4644691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 5680823 |
|---|
| End bp | 5681794 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639808776 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_956078 |
|---|
| Protein GI | 120406249 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.320011 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCTAC CCCGTGCGGC AATGGCCAAA ACTGCACCAG GCATCTGCAA AAATGCAGAG
ATGTCCTCGC CCGTCCGGCG CCCCAGCGCC GACGATCTCC TGGTGCTGCT GGCGGTCGGA
CGCACCGGCA GATACACCAC GGCGGCCGAC GAGCTCGGGC TCAACCACAC CACGATCAGC
CGCCGCATCG CTGCGCTGGA GCGCGCGATG GGCGGCCGCG TGCTGGCCCG CGTCGCGGGC
GGCTGGGAGC TCACCGATCT CGGGCGCGAG GCGCTCGCGG CTGCCGAGGC CGTCGAGACC
GCGGTGCGTT CTCTGGCCAC CGACGCCGCC GGGCAGCGCG CGCTGGAAGG CGTGGTGCGG
ATCTCGGCCA CCGACGGGTT CTCCGCCTAC ATCGCCGCGC CGGCCGCCGC GGCGGTGCAA
CGCAGACATC CCAAGGTGGC GGTCGAGATC GTGGCCACCA CGCGCCGCGC CACCCAGCAG
CGCTCGGGCC TGGACATCGA GGTGGTGGTG GGTGAGCCGA AGGTGCACCG GGCGAAGGCA
CTGCGGCTCG GCGACTACTG CCTCGGCCTC TACGCGTCCC GCGATTACCT GGCCGAACAC
GGCCACCCGA CGAGTGTCGC TGATCTGCAA CGGTTTCCGC TCGTGTACTT CATCGACGCG
ATGTTGCAGG TCGACGACCT CGACCTGGCG ACCAGCTTCG CGCCTGCCAT GCGGGAATCC
GTGACGTCGA CGAACGTGTT CGTCCACGTC GAGGCCACCC GGGCGGCGGC GGGGATCGGG
CTGCTGCCCT GCTTCATGGC CGACCGCCAC CCCGACCTGG AGCGGGTGTT GGCCGCGGCG
GTCTCGATCC GGCTCACCTA CTGGCTCGTC ACCCGCGCCG AGACGCTGCG CCGCCCCGAG
GTTGCGGCGG TCGTCGACGC GATCCGCGAC CGCGTTCGTG AGCAGCACGA CGTGCTGCTC
GGAGCGGGCT AA
|
|---|
| Protein sequence | MQLPRAAMAK TAPGICKNAE MSSPVRRPSA DDLLVLLAVG RTGRYTTAAD ELGLNHTTIS
RRIAALERAM GGRVLARVAG GWELTDLGRE ALAAAEAVET AVRSLATDAA GQRALEGVVR
ISATDGFSAY IAAPAAAAVQ RRHPKVAVEI VATTRRATQQ RSGLDIEVVV GEPKVHRAKA
LRLGDYCLGL YASRDYLAEH GHPTSVADLQ RFPLVYFIDA MLQVDDLDLA TSFAPAMRES
VTSTNVFVHV EATRAAAGIG LLPCFMADRH PDLERVLAAA VSIRLTYWLV TRAETLRRPE
VAAVVDAIRD RVREQHDVLL GAG
|
|---|
| |