| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5299 |
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| Symbol | |
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| ID | 4644689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 5678649 |
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| End bp | 5679407 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639808774 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_956076 |
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| Protein GI | 120406247 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.235447 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGC CTCCGGGTGG GCTTCGTGGT CGCACCGCGC TGGTGACCGG CGGGGCCGGC
GGGATCGGTG CGGCGTGCGC GCGGGCCCTG GCGGAGCAGG GAGTGACGGT CACGGTCGCC
GACATCGACG ACGTCGGCGC CAAGTCGGTA GCGCAGGAGA TCGGTGGAAA GGCCTGGGCG
CTGGACCTTC TCGATGTGGA GGCGCTGGAA GGCCTGCAGC TGGAGACCGA CATCCTGGTC
AACAACGCCG GCGTGCAGAG CATCCACGAA ATCGCCGAGT TCCCGCCGGA GAAGTTCCGC
TCGATGATGA GGTTGATGGT GGAGGCGCCG TTCCTGTTGA TCCGGGCGGC GGTGCCGCAC
ATGTACCGCA ACGAATTCGG TCGGGTCATC AACATCTCGT CGATCCATGG GCTGCGCGCC
TCGCCGTACA AGGCGGCCTA CGTCACCGCC AAGCACGCGT TGGAGGGATT GTCCAAGGTG
ACGGCACTCG AGGGCGGACC CCACGGCGTC ACCAGCAACT GCATCAACCC CGGCTACGTC
CGGACTCCGC TGGTGACCAG ACAGATCGCC GATCAGGCCA GAACGCACAA CATCGGTGAG
GATCAGGTGC TGTCTGACAT CCTTCTCAAG GAGAGCGCAG TGAAGCGTCT CGTGGAACCG
GAGGAGGTTG GCGCATTGGC CGCTTGGCTG GCATCGCCCG TTGCGGGCAT GGTCACGGGG
GCGTCGTACA CCATGGACGG TGGATGGAGC GCGCGGTGA
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| Protein sequence | MSEPPGGLRG RTALVTGGAG GIGAACARAL AEQGVTVTVA DIDDVGAKSV AQEIGGKAWA
LDLLDVEALE GLQLETDILV NNAGVQSIHE IAEFPPEKFR SMMRLMVEAP FLLIRAAVPH
MYRNEFGRVI NISSIHGLRA SPYKAAYVTA KHALEGLSKV TALEGGPHGV TSNCINPGYV
RTPLVTRQIA DQARTHNIGE DQVLSDILLK ESAVKRLVEP EEVGALAAWL ASPVAGMVTG
ASYTMDGGWS AR
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