| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5288 |
|---|
| Symbol | |
|---|
| ID | 4644678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 5665065 |
|---|
| End bp | 5666024 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639808763 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_956065 |
|---|
| Protein GI | 120406236 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.337017 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.266242 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACTTTG AGATCGACGA ACAGCAGCGG GATTTCGCCG CGAGCATCGA CGCCGCACTG
GGTGCTGCGG ACGTGCCCGC CGCGGTGCGG GCGTGGGGTG AGGGCGACAC CGCCCCCGGC
CGCAAGGTGT GGTCACAGCT TGCCGACCTC GGCGTGACCG CGCTGATGGT GCCCGAGAAG
TTCGACGGCA TCGAAGCCCA CCCGGTGGAC CTGGTGGTGG CGCTGGAGCG ACTGGGCCGG
TGGAACGTGC CGGGTCCGGT CGCCGAATCC GTCGCGGTGG CTCCGGTGCT GCTGGCCGAC
GATGATCGCA GCGCCGCGCT GGCCGCCGGA GAGCTGATCG CCACCGTCGC CGCACCGCCG
CTGGTCCCCC GAGCCGTGAA CGCGGACACC GCAGGCTTGA TCCTGCTCGC CGAGGACGGC
TCAGTCAGCA ATGCATCGGC AGGCGCCGAA CACGAGTCGG TGGATCCGAG CCGGAAGTTG
TTCGAGGTCA GTGCCTACGG TGACCGGAAG GCCGCCGATG TGGCGCGCGC GTTCGAATTC
GGCGCGCTGG CGACCTCGGC CCTGCTCGTC GGCGCGGCGC AGGCGATGCT GGACGCGTCG
GTGGAGTACG CCAAGCAGCG CAGCCAGTTC GGCACGGTGA TCGGCACCTA TCAGGCCATC
AAGCACAAGC TGGCCGACGT GTTGATCGCG GTCGAGCTGG CCCGGCCGCT GGTCTACGGC
GCGGCGCTGT CGCTCGCCGA CGGTTCGACA GACACCGGGC GCGACGTCAG CGCGGCCAAG
GTGGCCGCTG CCGACGCCGC CCTGCTGGCG GCGCGTTCCT CGTTGCAGAC CCACGGGGCG
ATCGGCTTCA CCCAGGAACA CGACCTGTCG CTGCTGCTGC TGCGGGTGCA GGCGCTGCGC
CCCGCCTGGG GCGACCCGAC ATGGCACCGG CGGCGAGTGT TGGAGGCACT GACCAAATGA
|
|---|
| Protein sequence | MNFEIDEQQR DFAASIDAAL GAADVPAAVR AWGEGDTAPG RKVWSQLADL GVTALMVPEK
FDGIEAHPVD LVVALERLGR WNVPGPVAES VAVAPVLLAD DDRSAALAAG ELIATVAAPP
LVPRAVNADT AGLILLAEDG SVSNASAGAE HESVDPSRKL FEVSAYGDRK AADVARAFEF
GALATSALLV GAAQAMLDAS VEYAKQRSQF GTVIGTYQAI KHKLADVLIA VELARPLVYG
AALSLADGST DTGRDVSAAK VAAADAALLA ARSSLQTHGA IGFTQEHDLS LLLLRVQALR
PAWGDPTWHR RRVLEALTK
|
|---|
| |