Gene Mvan_5253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5253 
Symbol 
ID4645268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5629099 
End bp5630256 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content68% 
IMG OID639808728 
Productlipid-transfer protein 
Protein accessionYP_956030 
Protein GI120406201 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.509405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCCG GAAAGGCCGC GATCGCTGGT ATCGGCGCGA CCGATTTCTC CAAGAACTCC 
GGCCGGAGCG AACTTCGTCT GGCGGCCGAG GCCGTCCTCG ATGCGCTCGA CGACGCCGGG
CTGACACCGT CCGATGTCGA CGGCTTGGTG ACGTTCACCA TGGACTCGAA CCTGGAGACC
GCGGTCGCGC GTTCCACCGG GATCGGGGAC CTGACGTTCT TCAGCCAGAT CGGCTACGGC
GGCGGCGCCG CGGCCGCGAC CGTGCAGCAG GCTGCGCTGG CCGTCGCTAC CGGGGTGGCC
GAAGTCGTTG TGGCGTACCG GGCGTTCAAC GAGCGCTCGG AGCACCGCTT CGGCCAGGTG
ATGACCGGCC TGACGGTCAA CGCGGATTCC CGCGGCGTCG AGTACAGCTG GTCCTATCCG
CACGGGCTCA GCACCCCGGC CGCGTCGGTG GCGATGATCG CCAGGCGTTA CATGCATGAA
TACGGCGCCA CCAGCGCGGA TTTCGGTGCC GTGTCGGTGG CCGACCGCAA GCACGCCGCG
ACGAACCCGA AGGCGCACTT CTACGGCAAG CCGATCACCA TCGAGGACCA CCAGAACTCG
CGCTGGATCG CCGAGCCGCT GCGGCTGCTG GATTGTTGCC AGGAAACCGA CGGTGGTGTC
GCCATCGTCG TCACCACCCC GGAGCGCGCC AAAGACCTCA GGCACCGCCC GGCGGTCATC
GAAGCGGCCG CCCAGGGTGC GGGCGCCGAC CAGTTCACCA TGTACTCGTA CTACCGCGAC
GAGCTCGGCC TGCCGGAGAT GGGTCTGGTG GGGCGGCAAC TGTGGGAGCA GAGCGGCCTG
TCCCCCGAGG ACATCCAGAC CGCGATCCTC TACGACCACT TCACCCCGTA CACACTGATC
CAGCTCGAAG AGCTCGGGTT CTGCGGCAAA GGGGAGGCCA AGGACTTCAT CGCAGGCGGC
GCGATCGAGA TCGGCGGCCG GCTGCCGATC AACACCCACG GCGGCCAGCT GGGCGAGGCC
TATATCCACG GGATGAACGG CATCGCCGAA GGTGTGCGTC AGCTGCGTGG GACCTCGGTC
AACCAGGTGC CCGATGTGGA GCATGTGCTG GTGACTGCGG GCACCGGGGT ACCTACGTCG
GGGCTGATCC TGGGCTGA
 
Protein sequence
MLSGKAAIAG IGATDFSKNS GRSELRLAAE AVLDALDDAG LTPSDVDGLV TFTMDSNLET 
AVARSTGIGD LTFFSQIGYG GGAAAATVQQ AALAVATGVA EVVVAYRAFN ERSEHRFGQV
MTGLTVNADS RGVEYSWSYP HGLSTPAASV AMIARRYMHE YGATSADFGA VSVADRKHAA
TNPKAHFYGK PITIEDHQNS RWIAEPLRLL DCCQETDGGV AIVVTTPERA KDLRHRPAVI
EAAAQGAGAD QFTMYSYYRD ELGLPEMGLV GRQLWEQSGL SPEDIQTAIL YDHFTPYTLI
QLEELGFCGK GEAKDFIAGG AIEIGGRLPI NTHGGQLGEA YIHGMNGIAE GVRQLRGTSV
NQVPDVEHVL VTAGTGVPTS GLILG