Gene Mvan_5236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5236 
Symbol 
ID4645251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5606905 
End bp5607690 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content64% 
IMG OID639808711 
Product4-oxalocrotonate decarboxylase 
Protein accessionYP_956013 
Protein GI120406184 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID[TIGR03220] 2-oxopent-4-enoate hydratase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.270652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTCCG TTGAGGTGCG CGAGAAGCTC GCCGCAGACC TGGCCGAGGC CGAGCGCAGT 
CGGGTGCCGA TCTCGCCGTT GACCGATGGT CAACCCGGGA TCGACGTGGT GGACGCCTAC
GAGATCCAGC TGATCAACAT CCGTCAGCGG GTGGCGGAGG GCGCCCGGGT GATCGGGCAC
AAGGTGGGCC TGTCGTCGGA GGCTATGCAG AAGATGATGA ACGTCGACGA GCCCGACTAC
GGGCATCTGC TCGACGAGAT GCAGGTCTTC GAGAACGTTG CGGTCAAATC GGCGAACTAC
CTGTATCCGC GGGTGGAGGT CGAGGTGGGC TTCATCCTGT CCGACGATCT GCCCGGCGCC
GGCTGCACCG AGGACGATGT GCTGGCCGCG ACGGCGGCGT TCGCGCCTGC CATCGAGCTG
ATCGACACCC GGATCACCAA CTGGCAGATC AAGTTGTGCG ACACCATCGC CGACAACGCG
AGCTCGGCCG GCTGGGTGCT CGGAGAGGCG CGGGTGTCGC CCAAGGACGT GGATATCAAG
AACATCGACG CGGTACTGAC CAACAACGGA GAGGTCGTCG CCGAGGGGCG CAGTGATGCG
GTGCTGGGAA ATCCGGTGAC CGCGGTGGCG TGGCTGGCGC GCAAGGTGGA GAGTTTCGGT
GTCCGGCTCA AGGCCGGCGA CATCGTGTTG CCGGGCTCGT GCACGCGTGC GATAGATGCA
CCTGCGGGCA GCCATTTCGT GGCCGACTTC ACCGGGTTAG GTTCAGTACG ACTGGATTTC
GAATAG
 
Protein sequence
MLSVEVREKL AADLAEAERS RVPISPLTDG QPGIDVVDAY EIQLINIRQR VAEGARVIGH 
KVGLSSEAMQ KMMNVDEPDY GHLLDEMQVF ENVAVKSANY LYPRVEVEVG FILSDDLPGA
GCTEDDVLAA TAAFAPAIEL IDTRITNWQI KLCDTIADNA SSAGWVLGEA RVSPKDVDIK
NIDAVLTNNG EVVAEGRSDA VLGNPVTAVA WLARKVESFG VRLKAGDIVL PGSCTRAIDA
PAGSHFVADF TGLGSVRLDF E