| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5234 |
|---|
| Symbol | |
|---|
| ID | 4645249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 5604926 |
|---|
| End bp | 5605978 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639808709 |
|---|
| Product | 4-hydroxy-2-ketovalerate aldolase |
|---|
| Protein accession | YP_956011 |
|---|
| Protein GI | 120406182 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | [TIGR03217] 4-hydroxy-2-oxovalerate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.899862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.187556 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG ACGAGATCTA CTTCAATCCC ATCTGGGACG TCCGGATGAC CGACACCTCG
CTGCGCGACG GGTCGCACCA CAAACGCCAC CAGTTCACCA AGGACGAGGT ACAGGCGATC
GTCGCCGCGC TGGACGCGGC GGGGGTGCCG GTCATCGAGG TGACCCACGG CGACGGACTG
GGCGGATCGA GCTTCAACTA CGGGTTCTCC AAGACCCCCG AGCAGGAGCT GATCAAGCTG
GCCGCCGAGA CGGCCAAGGA ATCCAAGATC GCCTTTCTGA TGCTGCCCGG GGTGGGCACC
AAGGAAGACA TCAAGGAAGC TCAGAGCAAC GGCGGGTCGA TCTGCCGGAT CGCCACCCAC
TGCACCGAGG CCGATGTCTC CATCCAGCAC TTCGGCCTGG CCCGTGAACT CGGCCTGGAG
ACCGTGGGCT TCCTGATGAT GAGCCACACC ATCCCGCCGG AGAAACTGGC CAAGCAGGCC
CGCATCATGG CCGACGCCGG CTGCCAGTGC GTCTACGTCG TCGACTCCGC CGGCGCGCTG
GTCCTGGAGG GCGTAGCCGA CCGGGTGGCG GCGCTGGTCG CCGAGTTGGG GTCGGATGCT
CAAGTTGGGT TCCATGGCCA CGAGAACCTG GGTCTGGGGG TGGCGAACTC GATCGAGGCC
GTCCGCGCCG GGGCCAAGCA GATCGACGGC TCGTGCCGCC GCTTCGGCGC CGGTGCAGGC
AACGCGCCGG TGGAGGCGCT CATCGGGGTG TTCGACAAGA TCGGCGTCAA GACCGGCATC
GATTTCTTCG ACATCGCCGA CGCCGCCGAG GAGGTCGTGG CGCCTGCGAT GCCGGCCGAA
TGCCTGCTCG ACCGCAATGC GCTGATCATG GGCTACTCCG GGGTGTACTC CAGCTTCCTC
AAGCACGCCA TCCGCCAGTC CGAGCGCTAC GGGGTGCCCG CGCACCAACT GCTGCACCGC
GCCGGGCAGC GCAAGCTCAT CGGCGGCCAG GAAGACCAGC TCATCGACAT CGCGCTGGAG
ATCAAGCGCG AACAGGAGAC TGCGAAGTCC TGA
|
|---|
| Protein sequence | MSTDEIYFNP IWDVRMTDTS LRDGSHHKRH QFTKDEVQAI VAALDAAGVP VIEVTHGDGL
GGSSFNYGFS KTPEQELIKL AAETAKESKI AFLMLPGVGT KEDIKEAQSN GGSICRIATH
CTEADVSIQH FGLARELGLE TVGFLMMSHT IPPEKLAKQA RIMADAGCQC VYVVDSAGAL
VLEGVADRVA ALVAELGSDA QVGFHGHENL GLGVANSIEA VRAGAKQIDG SCRRFGAGAG
NAPVEALIGV FDKIGVKTGI DFFDIADAAE EVVAPAMPAE CLLDRNALIM GYSGVYSSFL
KHAIRQSERY GVPAHQLLHR AGQRKLIGGQ EDQLIDIALE IKREQETAKS
|
|---|
| |